LOCUS BC039266 1633 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens DMRT-like family C2, mRNA (cDNA clone MGC:33892
IMAGE:5298983), complete cds.
ACCESSION BC039266
VERSION BC039266.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1633)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1633)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: n Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein.
FEATURES Location/Qualifiers
source 1..1633
/db_xref="H-InvDB:HIT000052184"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33892 IMAGE:5298983"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1633
/gene="DMRTC2"
/db_xref="GeneID:63946"
/db_xref="HGNC:HGNC:13911"
CDS 52..1155
/gene="DMRTC2"
/codon_start=1
/product="DMRT-like family C2"
/protein_id="AAH39266.1"
/db_xref="GeneID:63946"
/db_xref="HGNC:HGNC:13911"
/translation="MEPSDMPAGYHCPLDSAPWDETRDPQSTELIPRRAISRSPTCAR
CRNHGVTAHLKGHKRLCLFQACECHKCVLILERRRVMAAQVALRRQQEAQLKKHLMRR
GEASPKAPNHFRKGTTQPQVPSGKENIAPQPQTPHGAVLLAPTPPGKNSCGPLLLSHP
PEASPLSWTPVPPGPWVPGHWLPQGFSMPPPVVCRLLYQEPAVSLPPFPGFDPGTSLQ
LPTHGPFTTCPGSHPVLTAPLSGEPQGPPSQPRTHSTLILQPCGTPDPLQLQPQASGA
SCLARTSGPSEWQLQQEAAEALVGLKDSSQAPRVTPSVPPNPAWISLLHPCGPPAPAG
GRGFQPVGPCLRPSPAPSVALHIGRLGSISLLS"
BASE COUNT 324 a 517 c 397 g 395 t
ORIGIN
1 gtctttgggc gtcttcttga ctgaatctga ctccattgga ggctgtgatc catggaaccc
61 agtgacatgc ctgctggcta ccactgcccc ttagactctg ccccctggga tgagaccaga
121 gacccccaga gcacagagct gatccccagg agagccatca gccgctctcc aacctgcgcc
181 cgctgccgca accatggtgt caccgcccat ctcaagggcc acaagcgcct ctgcctcttc
241 caggcttgcg agtgtcacaa atgtgtcctc atcctggagc gccgcagggt catggctgcc
301 caggtggcct tgcgtaggca gcaggaggcg cagctaaaga agcacctgat gaggagaggg
361 gaagcctctc ccaaagctcc caaccacttc agaaagggaa ccactcagcc acaggtcccc
421 tctggaaagg agaacatagc accccagcct cagacccccc atggggcagt cctgctggca
481 ccgacacccc ccgggaagaa ctcctgtggg cctctgctgc tcagccatcc cccggaagcc
541 tcgcccttgt cctggactcc ggtgcctcct ggcccttggg tccctggaca ctggctgcct
601 caaggcttct ccatgccacc accagtggtg tgccgcctgc tgtaccaaga acctgctgtc
661 tctctgcctc ccttccctgg ctttgaccct ggcacctccc tccagctgcc cactcatggg
721 cccttcacca cctgcccagg atctcaccca gtactgacag ctcctctttc tggagagccc
781 caagggcccc ctagccagcc ccgcacacac tcaactctga tactccagcc ctgtggcacc
841 ccagaccctc ttcagctaca gccacaggcc tctggagcct cgtgcctggc ccggacatct
901 ggcccctcag agtggcagct gcagcaagag gcagctgaag ccctcgtggg gctgaaagat
961 tcatcccagg ctcctcgtgt gaccccttct gtgcccccca accctgcctg gatctccctg
1021 cttcacccct gtggcccacc agctcctgct ggaggaagag gattccagcc tgttggcccc
1081 tgtcttcgac ccagcccagc cccctctgtt gctctgcata ttggccgtct ggggtccatc
1141 tccctcctga gctagaaacc cagagatgga ggctgtcttg ctatggcagg gaggtgacag
1201 cctgctggca ctgtatattt agtgtcttac ttaaggattt atgcatggaa tttaatgtag
1261 tacaagcttc gggctttttt gtttgtttgt ttgtttgttt gtttaagctt tcaggtgctt
1321 cattagcttt cagttccttt ggtagtgtgg gcatttcctt ggctgacagt ggatattctt
1381 gtacccttct tgggtcctgg gatctcttga aatccccaat aaagagagag ttgtgctatt
1441 taagctgacc agtatctata aacgtgtttg catgagttta catcccagga ttccatgatt
1501 ctgtaaatgc ctatgcattc atgtctgtct ccatgcatgt gaaaacagga gagtgttttc
1561 attttgtgtc taggtttgtg tgagtaagca agaaataaac ctttgttgtt gtaagccaaa
1621 aaaaaaaaaa aaa
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