LOCUS BC039237 3142 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens neurofilament, light polypeptide, mRNA (cDNA clone
MGC:32648 IMAGE:4280159), complete cds.
ACCESSION BC039237
VERSION BC039237.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3142)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3142)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5453761.
FEATURES Location/Qualifiers
source 1..3142
/db_xref="H-InvDB:HIT000052164"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32648 IMAGE:4280159"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..3142
/gene="NEFL"
/gene_synonym="CMT1F"
/gene_synonym="CMT2E"
/gene_synonym="NF-L"
/gene_synonym="NF68"
/gene_synonym="NFL"
/db_xref="GeneID:4747"
/db_xref="HGNC:HGNC:7739"
/db_xref="MIM:162280"
CDS 98..1729
/gene="NEFL"
/gene_synonym="CMT1F"
/gene_synonym="CMT2E"
/gene_synonym="NF-L"
/gene_synonym="NF68"
/gene_synonym="NFL"
/codon_start=1
/product="neurofilament, light polypeptide"
/protein_id="AAH39237.1"
/db_xref="GeneID:4747"
/db_xref="HGNC:HGNC:7739"
/db_xref="MIM:162280"
/translation="MSSFSYEPYYSTSYKRRYVETPRVHISSVRSGYSTARSAYSSYS
APVSSSLSVRRSYSSSSGSLMPSLENLDLSQVAAISNDLKSIRTQEKAQLQDLNDRFA
SFIERVHELEQQNKVLEAELLVLRQKHSEPSRFRALYEQEIRDLRLAAEDATNEKQAL
QGEREGLEETLRNLQARYEEEVLSREDAEGRLMEARKGADEAALARAELEKRIDSLMD
EISFLKKVHEEEIAELQAQIQYAQISVEMDVTKPDLSAALKDIRAQYEKLAAKNMQNA
EEWFKSRFTVLTESAAKNTDAVRAAKDEVSESRRLLKAKTLEIEACRGMNEALEKQLQ
ELEDKQNADISAMQDTINKLENELRTTKSEMARYLKEYQDLLNVKMALDIEIAAYRKL
LEGEETRLSFTSVGSITSGYSQSSQVFGRSAYGGLQTSSYLMSTRSFPSYYTSHVQEE
QIEVEETIEAAKAEEAKDEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESEEAKEE
EEGGEGEEGEETKEAEEEEKKVEGAGEEQAAKKKD"
BASE COUNT 930 a 743 c 773 g 696 t
ORIGIN
1 gcacacagcc atccatcctc ccccttccct ctctcccctg tcctctctct ccgggctccc
61 accgccgccg cgggccgggg agccaccggc cgccaccatg agttccttca gctacgagcc
121 gtactactcg acctcctaca agcggcgcta cgtggagacg ccccgggtgc acatctccag
181 cgtgcgcagc ggctacagca ccgcacgctc agcttactcc agctactcgg cgccggtgtc
241 ttcctcgctg tccgtgcgcc gcagctactc ctccagctct ggatcgttga tgcccagtct
301 ggagaacctc gacctgagcc aggtagccgc catcagcaac gacctcaagt ccatccgcac
361 gcaggagaag gcgcagctcc aggacctcaa tgaccgcttc gccagcttca tcgagcgcgt
421 gcacgagctg gagcagcaga acaaggtcct ggaagccgag ctgctggtgc tgcgccagaa
481 gcactccgag ccatcccgct tccgggcgct gtacgagcag gagatccgcg acctgcgcct
541 ggcggcggaa gatgccacca acgagaagca ggcgctccag ggcgagcgcg aagggctgga
601 ggagaccctg cgcaacctgc aggcgcgcta tgaagaggag gtgctgagcc gcgaggacgc
661 cgagggccgg ctgatggaag cgcgcaaagg cgccgacgag gcggcgctcg ctcgcgccga
721 gctcgagaag cgcatcgaca gcttgatgga cgaaatctct tttctgaaga aagtgcacga
781 agaggagatc gccgaactgc aggcgcagat ccagtacgcg cagatctccg tggagatgga
841 cgtgaccaag cccgaccttt ccgccgcgct caaggacatc cgcgcgcagt acgagaagct
901 ggccgccaag aacatgcaga acgctgagga atggttcaag agccgcttca ccgtgctgac
961 cgagagcgcc gccaagaaca ccgacgccgt gcgcgccgcc aaggacgagg tgtccgagag
1021 ccgtcgtctg ctcaaggcca agaccctgga aatcgaagca tgccggggca tgaatgaagc
1081 gctggagaag cagctgcagg agctggagga caagcagaac gccgacatca gcgctatgca
1141 ggacacgatc aacaaattag aaaatgaatt gaggaccaca aagagtgaaa tggcacgata
1201 cctaaaagaa taccaagacc tcctcaacgt gaagatggct ttggatattg agattgcagc
1261 ttacaggaaa ctcttggaag gcgaggagac ccgactcagt ttcaccagcg tgggaagcat
1321 aaccagtggc tactcccaga gctcccaggt ctttggccga tctgcctacg gcggtttaca
1381 gaccagctcc tatctgatgt ccacccgctc cttcccgtcc tactacacca gccatgtcca
1441 agaggagcag atcgaagtgg aggaaaccat tgaggctgcc aaggctgagg aagccaagga
1501 tgagcccccc tctgaaggag aagccgagga ggaggagaag gacaaggaag aggccgagga
1561 agaggaggca gctgaagagg aagaagctgc caaggaagag tctgaagaag caaaagaaga
1621 agaagaagga ggtgaaggtg aagaaggaga ggaaaccaaa gaagctgaag aggaggagaa
1681 gaaagttgaa ggtgctgggg aggaacaagc agctaagaag aaagattgaa cccccatttc
1741 cttaattatt tcaggaataa ttctcccgaa atcaggtcaa ccccatcacc aaccaaccaa
1801 ccagttgagt tccagattct atgtgaatta aaaagtcaat atatgtataa ttctgagatg
1861 acttaggttg gacattcaat gttgtgctat gaatttcctc tttatgcaga gtatctgttt
1921 gcttgcagag tggctttctg gcttgctgcc agcctgtgca tggtccacgc ttatgagttc
1981 aggatctacg gcaatgtgaa tcattcagat gtttacaata aaaaacacca catgagtaaa
2041 tgaattcact aatgttaatg ttaaacttca tggaaaaata gtcctttgaa ccttcggtgg
2101 ttagcaatta aagaccctga gttatgtgca ataaatagta aataaagtta taccgaatga
2161 tgtatttttt gctgtggttg ttacttaatt aaaatacctt aaagatggca ccaatataaa
2221 gtatatacca gtggactatt gacctccaat tttttaaaaa gttgaaattt taacaattac
2281 caatactttt ttttcttcct tcaattggaa attctgaggg atacagttat gtcatgatta
2341 cttgtgaaat ctctccccac aaaaatttta ctgataataa acatgagtaa atgagaaagt
2401 ctataaataa caatacactt tgcctcataa cacgtgttgt gttaggtttt gggatggctt
2461 tctagggagc aattctgaaa ttacttgaca gatacactct ttatggtaaa caggtcattt
2521 cagagtctag agtgctaacc attacactat ggaaccatga taaataggtc atttcaaact
2581 gatatgtcac aatgcaatat ggatagaata tgaatcccat acattcatcc ctataactgc
2641 attttaaaat atagtctaaa tatcatggga ggaggttaaa acctgagaac atggtacaat
2701 aagaaggaat aattttttat ctatatataa tttcaggaga agggattaaa actaccaaag
2761 gttatttgcc actccactgc aaacatgttg cctgcaatcc tgagctcatg atttagtgtg
2821 ttgttaagcg taattctgtt gcctcaagta aataccactt aatgctacac atttttaaac
2881 ctttaaaagc tacagacaca agtaatgaaa ttatgagtca cttaaggggg gaggtaatat
2941 gcttgtatgt tacattgaca ttgctctgca tgtctctact gggaaatatt tggatttcaa
3001 tgatagcttg actggttgga cattgcatca aatacacgcc ccatgtatcc tttctgtcgt
3061 aaagttaaga acgctcttgc atttgatgtg gaataaatat agatgatatt acaaaaaaaa
3121 aaaaaaaaaa aaaaaaaaaa aa
//