LOCUS BC039198 1588 bp mRNA linear HUM 18-JAN-2007
DEFINITION Homo sapiens gap junction protein, beta 1, 32kDa, mRNA (cDNA clone
MGC:22506 IMAGE:4710239), complete cds.
ACCESSION BC039198
VERSION BC039198.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1588)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1588)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: c Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542846.
FEATURES Location/Qualifiers
source 1..1588
/db_xref="H-InvDB:HIT000052156"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22506 IMAGE:4710239"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1588
/gene="GJB1"
/gene_synonym="CX32"
/db_xref="GeneID:2705"
/db_xref="HGNC:HGNC:4283"
/db_xref="MIM:304040"
CDS 69..920
/gene="GJB1"
/gene_synonym="CX32"
/codon_start=1
/product="GJB1 protein"
/protein_id="AAH39198.1"
/db_xref="GeneID:2705"
/db_xref="HGNC:HGNC:4283"
/db_xref="MIM:304040"
/translation="MNWTGLYTLLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVW
GDEKSSFICNTLQPGCNSVCYDQFFPISHVRLWSLQLILVSTPALLVAMHVAHQQHIE
KKMLRLEGHGDPLHLEEVKRHKVHISGTLWWTYVISVVFRLLFEAVFMYVFYLLYPGY
AMVRLVKCDVYPCPNTVDCFVSRPTEKTVFTVFMLAASGICIILNVAEVVYLIIRACA
RRAQRRSNPPSRKGSGFGHRLSPEYKQNEINKLLSEQDGSLKDILRRSPGTGAGLAEK
SDRCSAC"
BASE COUNT 344 a 448 c 449 g 347 t
ORIGIN
1 agacattctc tgggaaaggg cagcagcagc caggtgtggc agtgacaggg aggtgtgaat
61 gaggcaggat gaactggaca ggtttgtaca ccttgctcag tggcgtgaac cggcattcta
121 ctgccattgg ccgagtatgg ctctcggtca tcttcatctt cagaatcatg gtgctggtgg
181 tggctgcaga gagtgtgtgg ggtgatgaga aatcttcctt catctgcaac acactccagc
241 ctggctgcaa cagcgtttgc tatgaccaat tcttccccat ctcccatgtg cggctgtggt
301 ccctgcagct catcctagtt tccaccccag ctctcctcgt ggccatgcac gtggctcacc
361 agcaacacat agagaagaaa atgctacggc ttgagggcca tggggacccc ctacacctgg
421 aggaggtgaa gaggcacaag gtccacatct cagggacact gtggtggacc tatgtcatca
481 gcgtggtgtt ccggctgttg tttgaggccg tcttcatgta tgtcttttat ctgctctacc
541 ctggctatgc catggtgcgg ctggtcaagt gcgacgtcta cccctgcccc aacacagtgg
601 actgcttcgt gtcccgcccc accgagaaaa ccgtcttcac cgtcttcatg ctagctgcct
661 ctggcatctg catcatcctc aatgtggccg aggtggtgta cctcatcatc cgggcctgtg
721 cccgccgagc ccagcgccgc tccaatccac cttcccgcaa gggctcgggc ttcggccacc
781 gcctctcacc tgaatacaag cagaatgaga tcaacaagct gctgagtgag caggatggct
841 ccctgaaaga catactgcgc cgcagccctg gcaccggggc tgggctggct gaaaagagcg
901 accgctgctc ggcctgctga tgccacatac caggcaacct cccatcccac ccccgaccct
961 gccctgggcg agcccctcct tctcccctgc cggtgcacag gcctctgcct gctggggatt
1021 actcgatcaa aaccttcctt ccctggctac ttcccttcct cccggggcct tccttttgag
1081 gagctggagg ggtggggagc tagaggccac ctatgccagt gctcaaggtt actgggagtg
1141 tgggctgccc ttgttgcctg cacccttccc tcttccctct ccctctctct gggaccactg
1201 ggtacaagag atgggatgct ccgacagcgt ctccaattat gaaactaatc ttaaccctgt
1261 gctgtcagat accctgtttc tggagtcaca tcagtgagga gggatgtggg taagaggagc
1321 agagggcagg ggtgctgtgg acatgtgggt ggagaaggga gggtggccag cactagtaaa
1381 ggaggaatag tgcttgctgg ccacaaggaa aaggaggagg tgtctggggt gagggagtta
1441 gggagagaga agcaggcaga taagttggag caggggttgg tcaaggccac ctctgcctct
1501 agtccccaag gcctctctct gcctgaaatg ttacacatta aacaggattt tacagcaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//