LOCUS BC039193 2222 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin C, mRNA (cDNA clone MGC:14624
IMAGE:4076286), complete cds.
ACCESSION BC039193
VERSION BC039193.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2222)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2222)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: g Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 67191207.
FEATURES Location/Qualifiers
source 1..2222
/db_xref="H-InvDB:HIT000052153"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14624 IMAGE:4076286"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2222
/gene="UBC"
/gene_synonym="HMG20"
/db_xref="GeneID:7316"
/db_xref="HGNC:HGNC:12468"
/db_xref="MIM:191340"
CDS 69..2126
/gene="UBC"
/gene_synonym="HMG20"
/codon_start=1
/product="ubiquitin C"
/protein_id="AAH39193.1"
/db_xref="GeneID:7316"
/db_xref="HGNC:HGNC:12468"
/db_xref="MIM:191340"
/translation="MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV
KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST
LHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI
QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
LRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE
GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR
GGV"
BASE COUNT 628 a 574 c 575 g 445 t
ORIGIN
1 gagttccgtc gcagccggga tttgggtcgc ggttcttgtt tgtggatcgc tgtgatcgtc
61 acttgacaat gcagatcttc gtgaagactc tgactggtaa gaccatcacc ctcgaggttg
121 agcccagtga caccatcgag aatgtcaagg caaagatcca agataaggaa ggcatccctc
181 ctgaccagca gaggctgatc tttgctggaa aacagctgga agatgggcgc accctgtctg
241 actacaacat ccagaaagag tccaccctgc acctggtgct ccgtctcaga ggtgggatgc
301 aaatcttcgt gaagacactc actggcaaga ccatcaccct tgaggtggag cccagtgaca
361 ccatcgagaa cgtcaaagca aagatccagg acaaggaagg cattcctcct gaccagcaga
421 ggttgatctt tgccggaaag cagctggaag atgggcgcac cctgtctgac tacaacatcc
481 agaaagagtc taccctgcac ctggtgctcc gtctcagagg tgggatgcag atcttcgtga
541 agaccctgac tggtaagacc atcaccctcg aggtggagcc cagtgacacc atcgagaatg
601 tcaaggcaaa gatccaagat aaggaaggca ttcctcctga tcagcagagg ttgatctttg
661 ccggaaaaca gctggaagat ggtcgtaccc tgtctgacta caacatccag aaagagtcca
721 ccttgcacct ggtactccgt ctcagaggtg ggatgcaaat cttcgtgaag acactcactg
781 gcaagaccat cacccttgag gtcgagccca gtgacactat cgagaacgtc aaagcaaaga
841 tccaagacaa ggaaggcatt cctcctgacc agcagaggtt gatctttgcc ggaaagcagc
901 tggaagatgg gcgcaccctg tctgactaca acatccagaa agagtctacc ctgcacctgg
961 tgctccgtct cagaggtggg atgcagatct tcgtgaagac cctgactggt aagaccatca
1021 ccctcgaagt ggagccgagt gacaccattg agaatgtcaa ggcaaagatc caagacaagg
1081 aaggcatccc tcctgaccag cagaggttga tctttgccgg aaaacagctg gaagatggtc
1141 gtaccctgtc tgactacaac atccagaaag agtccacctt gcacctggtg ctccgtctca
1201 gaggtgggat gcagatcttc gtgaagaccc tgactggtaa gaccatcact ctcgaggtgg
1261 agccgagtga caccattgag aatgtcaagg caaagatcca agacaaggaa ggcatccctc
1321 ctgatcagca gaggttgatc tttgctggga aacagctgga agatggacgc accctgtctg
1381 actacaacat ccagaaagag tccaccctgc acctggtgct ccgtcttaga ggtgggatgc
1441 agatcttcgt gaagaccctg actggtaaga ccatcactct cgaagtggag ccgagtgaca
1501 ccattgagaa tgtcaaggca aagatccaag acaaggaagg catccctcct gaccagcaga
1561 ggttgatctt tgctgggaaa cagctggaag atggacgcac cctgtctgac tacaacatcc
1621 agaaagagtc caccctgcac ctggtgctcc gtcttagagg tgggatgcag atcttcgtga
1681 agaccctgac tggtaagacc atcactctcg aagtggagcc gagtgacacc attgagaatg
1741 tcaaggcaaa gatccaagac aaggaaggca tccctcctga ccagcagagg ttgatctttg
1801 ctgggaaaca gctggaagat ggacgcaccc tgtctgacta caacatccag aaagagtcca
1861 ccctgcacct ggtgctccgt ctcagaggtg ggatgcagat cttcgtgaag accctgactg
1921 gtaagaccat caccctcgag gtggagccca gtgacaccat cgagaatgtc aaggcaaaga
1981 tccaagataa ggaaggcatc cctcctgatc agcagaggtt gatctttgct gggaaacagc
2041 tggaagatgg acgcaccctg tctgactaca acatccagaa agagtccact ctgcacttgg
2101 tcctgcgctt gagggggggt gtctaagttt ccccttttaa ggtttcaaca aatttcattg
2161 cactttcctt tcaataaagt tgttgcattc ccaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2221 aa
//