LOCUS BC039172 891 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens calmodulin-like 5, mRNA (cDNA clone MGC:20994
IMAGE:4753280), complete cds.
ACCESSION BC039172
VERSION BC039172.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 891)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 891)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: p Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38327636.
FEATURES Location/Qualifiers
source 1..891
/db_xref="H-InvDB:HIT000052149"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20994 IMAGE:4753280"
/tissue_type="Skin, squamous cell carcinoma"
/clone_lib="NCI_CGAP_Skn4"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..891
/gene="CALML5"
/gene_synonym="CLSP"
/db_xref="GeneID:51806"
/db_xref="HGNC:HGNC:18180"
/db_xref="MIM:605183"
CDS 118..558
/gene="CALML5"
/gene_synonym="CLSP"
/codon_start=1
/product="calmodulin-like 5"
/protein_id="AAH39172.1"
/db_xref="GeneID:51806"
/db_xref="HGNC:HGNC:18180"
/db_xref="MIM:605183"
/translation="MAGELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNL
SEAQLRKLISEVDGDGDGEISFQEFLTAARKARAGLEDLQVAFRAFDQDGDGHITVDE
LRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQE"
BASE COUNT 181 a 271 c 307 g 132 t
ORIGIN
1 agacgctgcc cggatccctg cggctgcctg cactctggac cacgagctct gagagcagca
61 ggttgagggc cggtgggcag cagctcggag gctccgcgag gtgcaggaga cgcaggcatg
121 gccggtgagc tgactcctga ggaggaggcc cagtacaaaa aggctttctc cgcggttgac
181 acggatggaa acggcaccat caatgcccag gagctgggcg cggcgctgaa ggccacgggc
241 aagaacctct cggaggccca gctaaggaaa ctcatctccg aggttgacgg cgacggcgac
301 ggcgaaatca gcttccagga gttcctgacg gcggcaagga aggccagggc cggcctggag
361 gacctgcagg tcgccttccg cgccttcgac caggatggcg acggccacat caccgtggac
421 gagctcaggc gggccatggc ggggctgggg cagccgctgc cgcaggagga gctggacgcc
481 atgatccgcg aggccgacgt ggaccaggac gggcgggtga actacgagga gttcgcgagg
541 atgctcgccc aggagtgagg ctccccgcct gtgtccccct ggctgcgctc tgagccttca
601 gggccaccgc ccgctgctgc ttttgtgctg ggactctccg gggaaacctg gtcggtggat
661 gggaaactgc ctccccctgg gaggaaggct ttgcgctccg gggcctggat gcggcgccct
721 cgggccgcct gcgagcccct ctctgcctcc agaccttggg cagaaggagg cctccttggg
781 cctggtcccc ctttgccctg cagtggaatg agggcccctc agccccgcat tgatctaaat
841 aaaggactgc cgagttccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa g
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