LOCUS BC039148 2146 bp mRNA linear HUM 17-JUL-2007
DEFINITION Homo sapiens keratin 79, mRNA (cDNA clone MGC:21767 IMAGE:4746574),
complete cds.
ACCESSION BC039148
VERSION BC039148.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2146)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2146)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 28 Row: m Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39753955.
FEATURES Location/Qualifiers
source 1..2146
/db_xref="H-InvDB:HIT000095543"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:21767 IMAGE:4746574"
/tissue_type="Skin, normal"
/clone_lib="NCI_CGAP_Skn3"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..2146
/gene="KRT79"
/gene_synonym="K6L"
/gene_synonym="KRT6L"
/db_xref="GeneID:338785"
/db_xref="HGNC:HGNC:28930"
/db_xref="MIM:611160"
CDS 36..1643
/gene="KRT79"
/gene_synonym="K6L"
/gene_synonym="KRT6L"
/codon_start=1
/product="keratin 79"
/protein_id="AAH39148.1"
/db_xref="GeneID:338785"
/db_xref="HGNC:HGNC:28930"
/db_xref="MIM:611160"
/translation="MRSSVSRQTYSTKGGFSSNSASGGSGSQARTSFSSVTVSRSSGS
GGGAHCGPGTGGFGSRSLYNLGGHKSISVSVAGGALSGRALGGFGFGSRAFMGQGAGR
QTFGPACPPGGIQEVTVNQSLLTPLHVEIDPEIQRVRTQEREQIKTLNNKFASFIDKV
RFLEQQNKVLETKWALLQEQGQNLGVTRNNLEPLFEAYLGSMRSTLDRLQSERGRLDS
ELRNVQDLVEDFKNKYEDEINKHTAAENEFVVLKKDVDAAYMGRMDLHGKVGTLTQEI
DFLQQLYEMELSQVQTHVSNTNVVLSMDNNRNLDLDSIIAEVKAQYELIAQRSRAEAE
AWYQTKYEELQVTAGKHGDNLRDTKNEIAELTRTIQRLQGEADAAKKQCQQLQTAIAE
AEQRGELALKDAQKKLGDLDVALHQAKEDLTRLLRDYQELMNVKLALDVEIATYRKLL
ESEESRMSGECPSAVSISVTGNSTTVCGGGAASFGGGISLGGSGGATKGGFSTNVGYS
TVKGGPVSAGTSILRKTTTVKTSSQRY"
BASE COUNT 537 a 569 c 649 g 391 t
ORIGIN
1 gccctctcat cctgccctcc ggcccctctg cagctatgag gtcctccgtc tctcggcaaa
61 catactccac aaaagggggc ttcagctcca actctgccag cggagggagt gggtcccagg
121 cccgcaccag cttcagctca gtgacggtgt ctcggagcag tggcagtggt ggcggggccc
181 actgtggccc cggcacaggt ggctttggca gccgaagcct ctataacttg gggggccaca
241 agagtatctc tgtcagtgtg gccggagggg ccttgtcggg gcgggctctg gggggctttg
301 gctttggcag cagggcattt atgggacagg gggctggcag gcagacgttt gggcctgctt
361 gtcctcctgg ggggatccag gaggtcactg tcaaccagag cctgctgacc cccctccatg
421 tggagattga ccccgagatc cagcgagtgc gcactcagga gcgggagcag atcaagaccc
481 tcaacaacaa gttcgcctcc ttcatcgaca aggtgcggtt cctggagcaa cagaataagg
541 tgctggagac caagtgggca ctgctgcagg agcagggcca gaacttgggt gtcaccagga
601 acaacctgga gcccctcttt gaggcctacc tgggtagcat gcggagcacg ctggacagac
661 ttcagagcga gcgggggagg ctggactcag agctcaggaa cgtgcaggac cttgtggagg
721 acttcaagaa caagtacgag gatgaaatca acaagcacac tgctgcagag aacgagtttg
781 tggtgctcaa gaaggatgtg gatgcagcat acatgggccg gatggatctg catggcaaag
841 tgggcacctt gacccaggag attgacttcc tgcagcaact ctatgaaatg gagctgagcc
901 aagtgcagac ccacgtgtct aacaccaatg tggtgctgtc catggacaac aaccgcaacc
961 tggacctgga cagcatcatc gccgaggtca aggcccagta tgagctgatt gcccagagga
1021 gccgggctga ggccgaggcc tggtaccaga ccaagtatga ggagctgcag gtgactgctg
1081 ggaagcatgg ggacaacctg cgggacacca agaacgagat tgctgagctc acccgcacta
1141 tccagaggct tcagggggag gctgatgcag ccaagaagca gtgtcagcag ctgcagacgg
1201 ccattgcgga agcggagcag cgtggggagc tggcactcaa ggatgctcag aagaagcttg
1261 gggatctgga tgtggccctg caccaggcca aggaggacct gacacggctg ctgcgtgact
1321 accaggagct gatgaatgtc aagctggccc tggacgtgga gattgccacc taccgcaagc
1381 ttctggagag cgaggagagc aggatgtctg gagaatgtcc cagtgcagtc agcatttctg
1441 tgactggcaa ctccaccact gtgtgcggag gtggcgcagc cagctttgga ggtggcatct
1501 ccctgggtgg gagtgggggg gccaccaagg gtggattcag cacaaatgtg ggctatagca
1561 ccgtcaaggg agggccagtc tctgcgggca cctccatcct gcggaagacc actacggtca
1621 agacgtccag ccagaggtat tagctgctga gccctgcaag ggcccctgca atcctgtccc
1681 tgccctcctc accccacctc tgctgtcctt tccagtcact tctcaggagc aggaacagcc
1741 aggggacctc agacccaggg tattttcata ccagactatt tgcatcttgg gaagcgctca
1801 aatctactca ggttttctcc ttggtcctgc agtaggatgg gagggaaggt taaagttgcc
1861 agcttgagtg atgtgcttgg gtgacttggg ggtgaccttt tgaccaccga gaggaggctg
1921 aatttctcaa gccattagga gagagagaaa ttgggagtgg tccccaaaga cccttcaacc
1981 tccccagtcc cccaccagac ccaccctctc cctgaatcta cccacatccc ccttccctgt
2041 ctgtgtctca ataaatggtg caactgcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2101 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//