LOCUS BC039109 1673 bp mRNA linear HUM 09-SEP-2005
DEFINITION Homo sapiens chromosome 1 open reading frame 177, mRNA (cDNA clone
MGC:42925 IMAGE:4837126), complete cds.
ACCESSION BC039109
VERSION BC039109.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1673)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1673)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 72 Row: k Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22749242.
FEATURES Location/Qualifiers
source 1..1673
/db_xref="H-InvDB:HIT000095518"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42925 IMAGE:4837126"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1673
/gene="C1orf177"
/gene_synonym="FLJ40201"
/db_xref="GeneID:163747"
CDS 16..1272
/gene="C1orf177"
/gene_synonym="FLJ40201"
/codon_start=1
/product="C1orf177 protein"
/protein_id="AAH39109.1"
/db_xref="GeneID:163747"
/translation="MRESQDAAGAHGWNRVGSTATKWFTGAPFGVQSHRFDISAVYPN
WKKFSTFTEAPYSTRYSTQVSHIGPGTYSSKETCFSKKKLMKEVDTGWAKAQEATRLT
QLPHFQYQAIMKEKRLKEQRLGPGSYNLKDFLEQLREKPCSTRGLLSSGEVRFRGLTG
NYYPGPGNYGEKGNPYTKLEENAWNRSHSEGLMCRMSNKPHPRPHQGSGLGPGTYFFK
SDLETYVARSVGTRGPYDTFSGDRSKPLPYGHYSMQKKKPRELMNFKSFVEELNSHHN
KKHGVFSKLPRNPKTPTERIYWANLSQCPRTLATSGPSFWLPQEKKCKPVNQPPFLLT
SKGSGAKACQMIMGSWNPVGVGRYLNTWLMETKDRRQRYRSLFLSGSKRYLSDLARDM
LMQERITPFTKGKCPPTVDYNSDPTP"
BASE COUNT 452 a 447 c 460 g 314 t
ORIGIN
1 gcgggcaggc ctgccatgag ggaaagccag gatgccgccg gagctcatgg ctggaaccgc
61 gtcggctcca cggccaccaa gtggttcacc ggggcgccct tcggggtgca gagccacagg
121 tttgacatct ctgctgttta tcccaactgg aagaagttca gcaccttcac tgaggcccca
181 tactccacgc gttattctac ccaagtgtcc cacataggcc ctgggactta cagctccaaa
241 gagacctgct tcagcaagaa gaagctgatg aaggaggtgg acacaggctg ggccaaggcc
301 caggaagcca cgcggctgac ccagctaccc cacttccagt accaggccat catgaaagag
361 aagcggctga aggagcaaag gctgggcccc ggctcctaca acctcaaaga cttcttagaa
421 cagctgcggg agaaaccatg tagcacccgg gggctgctca gctctgggga ggttcgcttc
481 cgaggactca ctgggaacta ctatccaggc cctggaaatt atggggagaa gggtaaccca
541 tacaccaagc tggaggagaa tgcctggaac cggtctcatt ccgagggcct catgtgcagg
601 atgagcaaca agccacaccc ccggcctcat caggggagtg gtctgggacc cggcacctac
661 ttcttcaaaa gcgaccttga gacatatgtg gcacgatccg tcggcacccg cggcccctat
721 gacactttct ctggtgatcg gagcaagcca ctgccttatg ggcactactc catgcagaaa
781 aaaaagccca gggaactgat gaatttcaag agctttgtag aagaacttaa ctcacatcac
841 aataagaagc atggggtttt ttctaaactt ccccgaaacc cgaaaacccc tacagagagg
901 atttactggg ccaacctcag ccagtgcccc cgcacactgg ccacatctgg ccccagtttc
961 tggcttccac aagagaagaa atgcaaaccc gtcaaccagc ccccattcct gttgacctcc
1021 aaggggtcag gtgcaaaggc ctgccagatg attatgggaa gctggaaccc agtaggtgtg
1081 ggccgctacc tcaacacctg gctgatggag acaaaggaca ggcggcagcg atatcgatcc
1141 ctattcctga gtggatccaa acgctacctc tcagacctgg cccgggacat gctcatgcag
1201 gaaaggatca caccatttac taaggggaag tgccctccaa ctgtggatta caattcagat
1261 cctactcctt aaagccacat gcgaaggaca gcctgcagtg accagagagc ccaaaggcct
1321 gaagacaaat ctgggggtga cagcatgggc atgggagtgg ggtgttttag agaaaggaca
1381 catgggcttg ggagagggga gagatgtatg gggatcacat ttgccagagc tgcatacctg
1441 aaggtcacag tgtcttccgg gacagctggg gacaggtatc ttttgttgca ggagatcaat
1501 tatcctgaga actcaactca gccagtgaca tgaacatggg ggccagagag cagatggact
1561 gaagggatgg gacgtagttg acacttgtgg gaccctttct attctaaagc cagagtgctt
1621 ggctccttgt ttattaaagt tcagaaagtg gaaaaaaaaa aaaaaaaaaa aaa
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