LOCUS BC039063 2510 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens acyl-Coenzyme A dehydrogenase, long chain, mRNA (cDNA
clone MGC:34642 IMAGE:5189329), complete cds.
ACCESSION BC039063
VERSION BC039063.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2510)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2510)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: i Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46488924.
FEATURES Location/Qualifiers
source 1..2510
/db_xref="H-InvDB:HIT000052127"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34642 IMAGE:5189329"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2510
/gene="ACADL"
/gene_synonym="ACAD4"
/gene_synonym="LCAD"
/db_xref="GeneID:33"
/db_xref="HGNC:HGNC:88"
/db_xref="MIM:609576"
CDS 174..1466
/gene="ACADL"
/gene_synonym="ACAD4"
/gene_synonym="LCAD"
/codon_start=1
/product="acyl-Coenzyme A dehydrogenase, long chain"
/protein_id="AAH39063.1"
/db_xref="GeneID:33"
/db_xref="HGNC:HGNC:88"
/db_xref="MIM:609576"
/translation="MAARLLRGSLRVLGGHRAPRQLPAARCSHSGGEERLETPSAKKL
TDIGIRRIFSPEHDIFRKSVRKFFQEEVIPHHSEWEKAGEVSREVWEKAGKQGLLGVN
IAEHLGGIGGDLYSAAIVWEEQAYSNCSGPGFSIHSGIVMSYITNHGSEEQIKHFIPQ
MTAGKCIGAIAMTEPGAGSDLQGIKTNAKKDGSDWILNGSKVFISNGSLSDVVIVVAV
TNHEAPSPAHGISLFLVENGMKGFIKGRKLHKMGLKAQDTAELFFEDIRLPASALLGE
ENKGFYYIMKELPQERLLIADVAISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKL
AELKTHICVTRAFVDNCLQLHEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGY
MWEYPIAKAYVDARVQPIYGGTNEIMKELIAREIVFDK"
BASE COUNT 850 a 476 c 531 g 653 t
ORIGIN
1 cgaccagcct gtggcgtggt tggggctccg gaagggcgcg cgcgagcgct tttttgggag
61 gacaccacag gtggacgcct cagctgatcg tcctccctcc cggggaccct gccccgagtc
121 gccgagtagc cgcagagtcg cctccgtcgc cccgccgccc ctgtgtttcg gacatggccg
181 cacgccttct ccgagggtcc ctacgcgtcc tgggcggcca ccgtgcgccg cgccagctgc
241 ccgccgcgcg atgttctcat tccggagggg aagaacgtct agaaactcct tctgctaaaa
301 aattaacaga tataggaatt cgaagaatct tttctccaga gcatgacatt ttccggaaaa
361 gtgtaaggaa gtttttccaa gaagaagtga ttcctcatca ctcagaatgg gagaaagctg
421 gagaagtaag tagggaggtt tgggaaaaag ctggaaaaca aggactgctt ggtgtcaata
481 ttgcagagca tcttggtgga attggagggg atctgtactc cgcagctatt gtctgggagg
541 agcaagctta ttcaaattgt tcaggcccag gttttagtat tcattcaggt attgtcatgt
601 cctatattac aaaccatggc tcagaagaac agattaagca ctttattccc cagatgactg
661 caggcaaatg tattggtgca atagcaatga cagagcctgg agctggaagt gacttacagg
721 gaataaaaac aaatgctaaa aaggatggaa gtgactggat tctcaatgga agcaaggtgt
781 tcatcagtaa tgggtcatta agtgatgttg tgattgtagt tgcggtcaca aatcatgaag
841 ctccctcccc tgcccatggt attagccttt ttctggtgga aaatggaatg aaaggattta
901 tcaagggacg aaagctacat aaaatgggat taaaagccca ggataccgca gaactattct
961 ttgaagatat acggttgcca gctagtgccc tacttggaga agagaataaa ggcttctatt
1021 acatcatgaa agagcttcca caggaaaggc tgttaattgc tgatgtggca atttcagcta
1081 gtgaattcat gtttgaagaa accaggaact atgttaaaca aagaaaagct tttggcaaaa
1141 cagttgctca cctacagaca gtgcaacata aattagcaga attaaaaaca catatatgtg
1201 taacccgagc atttgtggac aactgtctcc agctgcatga agcgaaacgt ttggactccg
1261 ccactgcttg catggcgaaa tattgggcat ctgagttaca aaatagtgta gcttacgact
1321 gtgtacagct ccatggaggt tggggataca tgtgggagta cccaattgca aaagcttatg
1381 tggatgccag agttcagcca atctatggtg gtacaaatga aataatgaag gagctgattg
1441 caagagagat tgtctttgac aagtagacat ctgcccacat cctggagtcc tattacagct
1501 aatctcgttt taaatctgct caagataaaa tgtaacttgg aaagcgagga aacactaaac
1561 atgtttttac ctgctctctc tatagagaag gaaataaaat ataaatataa gattaacaca
1621 gtggaaggac aaatctttga agccaaaatt ctagttttcc aatataaggt ttaacttaca
1681 gttttttatg tagccaaagg taaacggttt tctgaatctt gcctaggtgt ttcatttatc
1741 tctaaaattc taaaaagcat aaatcattca aatcttcaaa ccaaggcaga aataatttta
1801 tgtcgctata gtataaaaac attaataaga tagcacattg acttttaaag ggaaaagtaa
1861 atataactta gcatgtaaac tcatttcggc taccatttgc tccaaattcc ctagaacagt
1921 ggtttttacc actgtactcc aaccccgttt ttaagcaatg gaactctttc ttcaaacaaa
1981 agcttatgca gaacatctct gtgaaacgct gctgagtgag aactgctttc attgaagctg
2041 gaagccatca taccttactg ccttgaaacc cctaggactc agctaagtat ttgcctaacc
2101 ctgaccaggg aatgccttgg ttctgtcaat tgctgacatc tgagaacaca gaataatcca
2161 tcatttttaa tttcaagata ttggtacatt ttataggtat caaagcaatg gcttttcttt
2221 tgcaacagtt aatgtattta ttaacttaat aattacttta tgtcttctat aaaccaggct
2281 gttaatacaa tgatgacaaa caaaactggc aagatcacta aaaaataagt gaataaacaa
2341 ataagtagta aaataaggta agaagtaaat atgtaaaaga gataatttca agcataagtg
2401 caatgtaaat aataaagtaa gcatttaaaa ttcaaaaaaa aaaaaaaaaa aaaaaaaaaa
2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//