LOCUS BC038949 3167 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens AXIN1 up-regulated 1, mRNA (cDNA clone MGC:47534
IMAGE:5547938), complete cds.
ACCESSION BC038949
VERSION BC038949.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3167)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3167)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-NOV-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 82 Row: g Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17136074.
FEATURES Location/Qualifiers
source 1..3167
/db_xref="H-InvDB:HIT000052090"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:47534 IMAGE:5547938"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3167
/gene="AXUD1"
/gene_synonym="DKFZp566F164"
/gene_synonym="TAIP-3"
/gene_synonym="URAX1"
/db_xref="GeneID:64651"
/db_xref="HGNC:HGNC:14300"
/db_xref="MIM:606458"
CDS 162..1931
/gene="AXUD1"
/gene_synonym="DKFZp566F164"
/gene_synonym="TAIP-3"
/gene_synonym="URAX1"
/codon_start=1
/product="AXIN1 up-regulated 1"
/protein_id="AAH38949.1"
/db_xref="GeneID:64651"
/db_xref="HGNC:HGNC:14300"
/db_xref="MIM:606458"
/translation="MTGLLKRKFDQLDEDNSSVSSSSSSSGCQSRSCSPSSSVSRAWD
SEEEGPWDQMPLPDRDFCGPRSFTPLSILKRARRERPGRVAFDGITVFYFPRCQGFTS
VPSRGGCTLGMALRHSACRRFSLAEFAQEQARARHEKLRQRLKEEKLEMLQWKLSAAG
VPQAEAGLPPVVDAIDDASVEEDLAVAVAGGRLEEVSFLQPYPARRRRALLRASGVRR
IDREEKRELQALRQSREDCGCHCDRICDPETCSCSLAGIKCQMDHTAFPCGCCREGCE
NPMGRVEFNQARVQTHFIHTLTRLQLEQEAESFRELEAPAQGSPPSPGEEALVPTFPL
AKPPMNNELGDNSCSSDMTDSSTASSSASGTSEAPDCPTHPGLPGPGFQPGVDDDSLA
RILSFSDSDFGGEEEEEEEGSVGNLDNLSCFHPADIFGTSDPGGLASWTHSYSGCSFT
SGILDENANLDASCFLNGGLEGSREGSLPGTSVPPSMDAGRSSSVDLSLSSCDSFELL
QALPDYSLGPHYTSQKVSDSLDNIEAPHFPLPGLSPPGDASSCFLESLMGFSEPAAEA
LDPFIDSQFEDTVPASLMEPVPV"
BASE COUNT 621 a 926 c 903 g 717 t
ORIGIN
1 ccacgcgtcc ggcggctgga ccgacggctg ccgggccgag cgcacagagt cgcggcgcag
61 ggggcgtccc cggccgggac gcgggtcgcg tcgttgtcct ccgcgagcgt ccggattgca
121 ggctgtctgt ccccagaccc cagagcacgt ccggcaccac catgactggg ctgttgaaga
181 ggaaatttga ccagctggat gaggacaact cctcggtctc ctcctcctcc tcttcctctg
241 ggtgccagtc tcgctcctgc tccccaagct cttctgtctc ccgtgcctgg gactcagagg
301 aggaaggccc ctgggatcag atgcccctgc ctgaccgtga cttctgcggc cccagaagtt
361 tcacccccct gtctatcctg aagcgagctc gccgggagcg cccaggccgt gtagcctttg
421 atgggatcac cgtcttctac ttcccccgct gccagggctt caccagtgtg cccagccgtg
481 gtggctgtac tctgggtatg gcccttcgcc acagtgcttg ccgtcgcttc tctttggctg
541 agtttgcgca ggagcaagcc cgtgcacggc acgagaagct ccgccagcgc ttgaaagagg
601 agaagttgga gatgctgcag tggaagcttt cggcagctgg ggtaccccag gcagaggcag
661 ggctgccacc tgtggtggat gccattgatg acgcctctgt ggaggaggac ttggcagtcg
721 ctgtggcagg tggccggttg gaagaagtga gcttcctaca gccctaccca gcccggcgac
781 gtcgagctct gctgagggct tcaggtgtgc gaaggatcga tcgggaggag aagcgggagc
841 tgcaggcact gcgccaatcc cgggaggatt gtggctgtca ctgcgatagg atctgcgacc
901 ctgagacctg cagctgcagc ctggcaggca tcaagtgcca gatggaccac acagcattcc
961 cctgtggctg ctgcagggag ggctgtgaga accccatggg ccgtgtggaa tttaatcagg
1021 caagagttca gacccatttc atccacacac tcacccgcct gcagttggaa caggaggctg
1081 agagctttag ggagctggag gcccctgccc agggcagccc acccagccct ggtgaggagg
1141 ccctggtccc tactttccca ctggccaagc cccccatgaa caatgagctg ggagacaaca
1201 gctgcagcag cgacatgact gattcttcca cagcatcttc atcagcatcg ggcactagtg
1261 aggctcctga ctgccccacc cacccaggcc tgcctggccc tggcttccag cctggcgttg
1321 atgatgacag cctggcacgc atcttgagtt tcagtgactc tgacttcggt ggggaggagg
1381 aggaagagga ggaagggagt gtggggaacc tggacaacct cagctgcttc catccagctg
1441 acatctttgg tactagtgac cctggtggcc tggccagctg gacccacagc tattctggct
1501 gtagcttcac atcaggcatc ctggatgaga atgccaacct ggatgccagc tgcttcctaa
1561 atggtggcct tgaagggtca agggaaggca gccttcctgg cacctcagtg ccacccagca
1621 tggacgctgg ccggagtagc tcagtggatc tcagcttgtc ttcttgtgac tcctttgagt
1681 tactccaggc tctgccagat tatagtctgg ggcctcacta cacatcacag aaggtgtctg
1741 acagcctgga caacatcgag gcacctcact tccccctgcc tggcctgtct ccacctgggg
1801 atgccagcag ttgcttcctg gagtccctca tgggcttctc cgagccagcc gccgaagccc
1861 tagatccctt tattgacagc cagtttgagg acactgtccc agcatctcta atggagcctg
1921 tgccggtgtg aggaccagga tgtcttttcc cagccccaag agacctgttg ctgctttctt
1981 gtaattatgg ggctccccag agtctgcgta acagtctccc actggctggc tcacccacag
2041 gtgccatgtg cacactcctg gttttcaaac aattctctgg atttatttat ttgttttaac
2101 ttttctgtgc tgaagagagg actaggggga gggggcttcc cctttcagct gcccggcccc
2161 ccacacccac agcttgctct tctatctcca caacgtgagc ctggaagagg agaaaatgtg
2221 gctcctctgg agcttggcag accacttttc ggtctttgcg tgatgttcct tagcccaaag
2281 acggtgagac agggctgaaa tcaggtggct tctgccaccc tgagccctag acccatgggt
2341 ggctaaatcc actggactgt gaagactata atttatttcc ataatttatt tggagattga
2401 ggaggctttg gttgcacttc tttggctggt gggtaatgcc aggggtgggg tgggcacagg
2461 ccctcaagag ccccttttgc cttgtagtcc tacaccttgc cctgcctggg ctttggtgca
2521 gactaggtgt ggatttgagc tctgtgatct atgtctgctg cctggctcct agatggctct
2581 gcgggcaggt gctggccaag gacatcatct aggcaggggg agagcctggg ctgaacagct
2641 gtgaccaaaa ctcccttctg ccccaccctg ccccctccac ttcctgccct ctgttccatc
2701 ttcccccttc ccaaaggcca cagcctttat tccaggccca gggatgtagg agggggaagg
2761 aggaaacagg aagcccagag agggcaaagg gcctacctcg gggcgcgaac catgccccag
2821 actattatct cagggctttc tgggcactgc acttcagcgt ggcccacctg cccatgccct
2881 gaggccagtt ggcgaggggt ggctcctgag ggtttttata ccctttgttt gctaatgttt
2941 aattttgcat cataatttct acattgtccc tgagtgtcag aactataatt tattccattt
3001 ctctctgtgt ctgtgccaag aaacgcaggc tctgggcctg ccccttgccc aggaggcctt
3061 gccagcctgt gtgcttgtgg gaacaccttg tacctgagct tacaggtacc aataaagagg
3121 ctttattttt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//