LOCUS BC038233 4525 bp mRNA linear HUM 30-JAN-2008
DEFINITION Homo sapiens pleckstrin and Sec7 domain containing 2, mRNA (cDNA
clone MGC:45998 IMAGE:5752229), complete cds.
ACCESSION BC038233
VERSION BC038233.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4525)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4525)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: m Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14150034.
FEATURES Location/Qualifiers
source 1..4525
/db_xref="H-InvDB:HIT000052005"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45998 IMAGE:5752229"
/tissue_type="Brain, Lung, Testis, adult, pooled whole"
/clone_lib="NIH_MGC_115"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..4525
/gene="PSD2"
/gene_synonym="DKFZp761B0514"
/db_xref="GeneID:84249"
/db_xref="HGNC:HGNC:19092"
CDS 183..2498
/gene="PSD2"
/gene_synonym="DKFZp761B0514"
/codon_start=1
/product="pleckstrin and Sec7 domain containing 2"
/protein_id="AAH38233.1"
/db_xref="GeneID:84249"
/db_xref="HGNC:HGNC:19092"
/translation="MEEDKLLSAVPEEGDATRDPGPEPEEEPGVRNGMASEGLNSSLC
SPGHERRGTPADTEEPTKDPDVAFHGLSLGLSLTNGLALGPDLNILEDSAESRPWRAG
VLAEGDNASRSLYPDAEDPQLGLDGPGEPDVRDGFSATFEKILESELLRGTQYSSLDS
LDGLSLTDESDSCVSFEAPLTPLIQQRARDSPEPGAGLGIGDMAFEGDMGAAGGDGEL
GSPLRRSISSSRSENVLSRLSLMAMPNGFHEDGPQGPGGDEDDDEEDTDKLLNSASDP
SLKDGLSDSDSELSSSEGLEPGSADPLANGCQGVSEAAHRLARRLYHLEGFQRCDVAR
QLGKNNEFSRLVAGEYLSFFDFSGLTLDGALRTFLKAFPLMGETQERERVLTHFSRRY
CQCNPDDSTSEDGIHTLTCALMLLNTDLHGHNIGKKMSCQQFIANLDQLNDGQDFAKD
LLKTLYNSIKNEKLEWAIDEDELRKSLSELVDDKFGTGTKKVTRILDGGNPFLDVPQA
LSATTYKHGVLTRKTHADMDGKRTPRGRRGWKKFYAVLKGTILYLQKDEYRPDKALSE
GDLKNAIRVHHALATRASDYSKKSNVLKLKTADWRVFLFQAPSKEEMLSWILRINLVA
AIFSAPAFPAAVSSMKKFCRPLLPSCTTRLCQEEQLRSHENKLRQLTAELAEHRCHPV
ERGIKSKEAEEYRLKEHYLTFEKSRYETYIHLLAMKIKVGSDDLERIEARLATLEGDD
PSLRKTHSSPALSQGHVTGSKTTKDATGPDT"
BASE COUNT 1072 a 1194 c 1272 g 987 t
ORIGIN
1 ggctccggca cctgaaggga cgcgggcggg cgcgggcagc tccgaccggc ggcggcgggg
61 cgggacaggc agcccggcgg cctccgatgg ccccgccgtg agaggccgga cccgcggcgg
121 ggaccagcag cggtctagag gagtcccagg agcagccagg acaggcggaa gcagtggctg
181 ccatggagga ggacaagctc ttatctgcag tgcctgagga aggcgatgcc acccgtgacc
241 ccggtccaga gcctgaagag gagccagggg tccggaatgg gatggccagt gagggcctga
301 acagcagcct ctgcagccca gggcacgagc gaaggggcac cccagcggac actgaggaac
361 ccacgaagga cccagatgtg gccttccatg gcctcagcct tggcctctct ctcaccaatg
421 gcctagccct ggggccagac ttgaacattc tggaagattc agcggagtcc aggccctgga
481 gggctggcgt gctggcagag ggggacaatg cttccaggag cctctaccca gatgctgagg
541 accctcagct ggggttggat ggtcccgggg agccagatgt gcgggatggc ttcagcgcca
601 cgtttgagaa gattctggag tcagagctgc tgcggggcac ccagtacagc agcctcgact
661 ccctagacgg gctgagcctc acggatgaga gcgacagctg cgtcagcttc gaggcccccc
721 tcacacccct catccagcag cgggcccgtg acagccctga gccaggggct gggttgggca
781 ttggggacat ggcgtttgag ggggacatgg gggcggctgg tggtgatggg gagctgggca
841 gccccctgcg gcgctccatc tccagcagcc gctctgagaa tgtcctgagc cgcctgtctc
901 tcatggccat gcccaatgga ttccatgaag atggccctca gggcccaggg ggggatgagg
961 atgatgatga ggaggacacg gacaagttgc tgaactcagc cagtgacccc agcctgaagg
1021 atggcctgtc agactcagac tctgagctca gcagctcgga ggggttggag cctggtagtg
1081 cagaccctct ggccaacggg tgccaggggg tcagtgaagc tgctcatcgg ctggcacgcc
1141 gtctctacca cctcgagggc ttccagcgct gtgatgtggc ccggcagctg ggcaagaaca
1201 acgagtttag caggctggtg gccggggagt acctcagttt cttcgacttc tcgggcttga
1261 ctctggacgg agcactcaga acattcttga aggccttccc gctgatgggg gagacacaag
1321 agcgtgagcg ggtcctcaca cacttctccc gccggtactg ccagtgcaac cctgatgaca
1381 gcacttcgga agatgggatc cacacgctca cctgtgccct gatgctgctc aacacggacc
1441 tgcacggcca caacattggc aaaaagatgt cctgtcagca attcattgcc aacttggacc
1501 agctgaatga tggccaagac tttgccaaag acctgctgaa gaccctttac aactccatca
1561 agaatgaaaa gctggaatgg gccattgatg aggatgagct gaggaaatcc ctgtctgagc
1621 tggtggatga caagttcggg acaggcacga agaaggtgac gcgaatcctg gatggtggca
1681 accccttcct ggatgtccca caggcgctca gtgccaccac ctacaagcac ggcgtcctga
1741 cccggaagac tcacgctgac atggatggca agaggacgcc ccgtgggagg cgtggctgga
1801 agaaattcta cgcagtgctc aaagggacca tcctgtacct gcagaaggat gagtacaggc
1861 ctgacaaagc tctatcggag ggtgacctga agaacgccat tcgcgtgcat cacgctctgg
1921 ccaccagggc ctctgactac agcaagaagt ccaacgtgct gaagcttaag acagccgact
1981 ggagggtatt cctcttccag gcaccgagca aggaagaaat gctgtcctgg atcctcagga
2041 tcaacctggt ggcagccatc ttctctgccc cggccttccc agccgctgtc agctccatga
2101 agaagttctg tcggcccctg ctgccctcct gcaccacccg cctctgccag gaggagcaac
2161 tgcggtctca tgagaataag ttgaggcagc tgactgcgga gctggccgaa cacaggtgtc
2221 acccagtcga gaggggcatc aagtccaagg aggccgagga gtaccggttg aaggagcact
2281 atctcacctt cgagaaaagc cgttatgaga cctatatcca cctcctggct atgaaaatca
2341 aagtgggctc agatgatctg gagcggattg aggcccggct ggccactctg gaaggggatg
2401 acccttctct ccggaagaca cattcaagcc ctgccctcag ccagggccat gtgactggca
2461 gcaaaaccac aaaggatgcc actgggcctg atacttagct gacatggatt tgcagacccc
2521 agggtgggca gatgtctcca gtggggtcag tgagcacaat tccagccagg ggccacttgg
2581 accaagctcc agtcagttga tgggcagcta gaggggtgca gaaagcctgt gggcccagga
2641 gatggagatg ccgtttgtgg cgttgatctc cttgcgtcct tgggcatctc cgggcatcag
2701 accctctccc tggcccttgt tttcctctcc accatggagc ctcattttgt aggccagttg
2761 tgtgcatgct ctagacacca cctcgctgga gaagctggaa gggctgttgt cttcccaggt
2821 ctttctcttc tcatcaagct cctctcctca tcttttttgt gtgtgagggc aggtcttgac
2881 tctaggtctc agctggaacc ccaccctttc tcctcctcct tcctctgagt tgaccagcag
2941 caggtctgcc gaccaccagc accatcctct cctcccagca gcctccagaa ccatgcccag
3001 gtctcctgcc tcacatcaca ataatctggg acccaggctt gtgccctttc agtgtaaagc
3061 tgactccatc acatgtgcat ccacttcttt tcatccattg agatcacact gcctcctttt
3121 tatacagaca caaatataca tctataagaa taatatatac ataaggaacc cctgaaagat
3181 ggttttggaa ctggaatcag ttagaggatg aaatcagata aaggaaaagc ctattttgga
3241 gcttcccctg ttaggaagga tggctgcacc tggccccctg gcattcctga cgctctagga
3301 gggaaggggg aggcagtgct ggcctccctt gccctgtttt tccctcttcc agctgacctg
3361 tgacttatac tgctcttacc gatgatactt ttggaaaaaa tagagcgtgt atgcaccgcc
3421 ccgtttgtcc catggatatc ctggggtgtg agtcggatgg gaccacggcc ctgtttatat
3481 ttgggtcttt atgttggtgc tgccaggtct ctgagctcca gaggtggcct cttggacaga
3541 tctactgcta taggaataaa agacactctg tctcgcaaat ggctgcttgt caacaagccc
3601 aaagatgctt gtcggaggac ggttatggaa gcccttaatt cttggttgtg ggaaaaggtg
3661 gaatgacaag ttattgattg tttttctgtc gctatttctt tcatttgtct agtgaatcag
3721 aaaggcttag ccaaggccac atctgggaag agtggagaaa tttgccactt gacgatcacg
3781 gattagctag cacctttaag ccctgcattt ctccaactga caagtgggtg ggggtgatgg
3841 cacattcagt gtggctatga agagcgaatc ctctctattg tttaaataga ttactgtagt
3901 ttggccagga atttggcgtc agtggtaaca cacttagtta ataaaataag ccaggcttgc
3961 aactaagtat ctaactttac aggcccactc acatttgagg caaggggcta ttgagtatgt
4021 ggagagatgt agtgatttaa attcagatta tttaagttgg atcagctgaa gtgtgtttta
4081 gacccaaacc atctggcccc ttcgttttgc tcagaggaag taaatgttca cttaaatgaa
4141 attgaaaacg ccatgtggca ccacaaaaga gctctctgta ctttccccat gctgcctcaa
4201 aagttctgtg agtttcgggg tcagtgtccc acccttcact tcccgagggc gggtgagtgg
4261 agagcagagc caggagctct ggcagctgtg gacagatgtg cttcctgagc atgggttgtg
4321 cctcccatca gtaaaaaaat gtttagttca cttccttaat tgtataatta tttatttgta
4381 aattatatac atgtactact gtactaaaat attatgtaca ttataaaaca tacacaaaaa
4441 tagaaattta aaaaagatga gatgaaaata aatctaagtc aaagttctaa aaaaaaaaaa
4501 aaaaaaaaaa aaaaaaaaaa aaaaa
//