LOCUS BC038232 3212 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens KIAA1549, mRNA (cDNA clone IMAGE:5741123), partial
cds.
ACCESSION BC038232
VERSION BC038232.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3212)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3212)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (30-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: k Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction.
FEATURES Location/Qualifiers
source 1..3212
/db_xref="H-InvDB:HIT000095148"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5741123"
/tissue_type="Duodenum, adenocarcinoma"
/clone_lib="NIH_MGC_88"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3212
/gene="KIAA1549"
/db_xref="GeneID:57670"
/db_xref="HGNC:HGNC:22219"
CDS <1..2483
/gene="KIAA1549"
/codon_start=3
/product="KIAA1549 protein"
/protein_id="AAH38232.1"
/db_xref="GeneID:57670"
/db_xref="HGNC:HGNC:22219"
/translation="TRPVSELLRNLSVVEFSFYLGYPVLQIAEPFQYPQLNLSQLLKS
SWVRTVLLGVMEKQLQNEVFQAEMERKLAQLLSEVSTRRRMWRRATVAAGNSVVQVVN
VSRLEGDDNPVQLIYFVEDQDGERLSAVKSSDLINKMDLQRAAIILGYRIQGVIAQPV
DRVKRPSPESQSNNLWVIVGVVIPVLVVMVIVVILYWKLCRTDKLDFQPDTVANIQQR
QKLQIPSVKGFDFAKQHLGQHNKDDILIIHEPAPLPGPLKDHTTPSENGDVPSPKSKI
PSKNVRHRGRVSPSDADSTVSEESSERDAGDKTPGAVNDGRSHRAPQSGPPLPSSGNE
QHSSASIFEHVDRISRPPEASRRVPSKIQLIAMQPIPAPPVQRPSPADRVAESNKINK
EIQTALRHKSEIEHHRNKIRLRAKRRGHYEFPVVDDLSSGDTKERHRVYRRAQMQIDK
ILDPTASVPSVFIEPRKSSRIKRSPKPRRKHQVNGCPADAEKDRLITTDSDGTYRRPP
GVHNSAYIGCPSDPDLPADVQTPSSVELGRYPALPFPASQYIPPQPSIEEARQTMHSL
LDDAFALVAPSSQPASTAGVGPGVPPGLPANSTPSQEERRATQWGSFYSPAQTANNPC
SRYEDYGMTPPTGPLPRPGFGPGLLQSTELVPPDPQQPQASAEAPFAARGIYSEEMPS
VARPRPVGGTTGSQIQHLTQVGIASRIGAQPVEIPPSRGSQYGGPGWPSYGEDEAGRR
EATHMLGHQEYSSSPLFQVPRTSGREPSAPSGNLPHRGLQGPGLGYPTSSTEDLQPGH
SSASLIKAIREELLRLSQKQSTVQNFHS"
BASE COUNT 803 a 928 c 852 g 629 t
ORIGIN
1 acacgcgtcc ggtgagcgag ctgctcagaa acttgagtgt ggtggagttc agtttctatc
61 tgggataccc agtgctgcag atcgcagagc ccttccagta tccacagctc aacttatctc
121 agttgctgaa gtcctcttgg gtcagaacag ttctcctggg cgtcatggag aagcaactcc
181 agaatgaagt gtttcaagcc gagatggaac gcaagctggc ccagctgctc agcgaggttt
241 ccaccagaag gcggatgtgg agaagggcca ctgtagctgc agggaacagt gtggtgcagg
301 tggtaaatgt gtcgaggctg gagggagatg acaatccggt acagctcatc tactttgtgg
361 aggatcaaga tggagaaaga ctcagtgcag tcaagtcttc ggacctgatt aacaaaatgg
421 acctccagag agcagccatc atcttgggtt accgaattca aggtgtcatt gcccagcctg
481 tcgacagggt gaagaggccg tctccggaat cccagagcaa caacttgtgg gtcattgttg
541 gcgtggtcat cccagtgctg gtggtgatgg tgattgttgt catcctctac tggaaactat
601 gccgcacaga caagctagac tttcagcctg acactgtggc caacattcag cagcgtcaga
661 agctgcagat ccctagtgtg aagggcttcg attttgctaa gcagcatctg ggtcagcaca
721 ataaagacga catattgatt attcatgagc cagcgccact gccaggacct ctgaaggacc
781 acaccacgcc ctcggaaaat ggagacgtgc caagccccaa gtcaaagatc ccttccaaga
841 atgttcgtca cagaggaaga gtttctccct cagatgctga ctctacggtc agtgaagagt
901 ccagcgagag ggacgcagga gataagacgc cgggagccgt caacgatggc aggtcccaca
961 gagctccgca gagcgggcca ccactgccca gttcgggaaa tgagcagcac tcatcagcct
1021 ccatcttcga gcacgtggac aggatctccc gccccccgga ggctagccgg cgggtcccca
1081 gtaagatcca gcttatcgcc atgcagccga tcccggcacc tcccgtccag cgcccctccc
1141 cagccgaccg agtggcggaa agcaataaaa tcaacaaaga gattcagacc gcgctgcggc
1201 acaagtctga gatcgagcac catcgcaaca agatccgcct gcgcgccaag cgccgcgggc
1261 actacgagtt cccggtggta gacgacctgt cctcgggcga cactaaggag cgacaccggg
1321 tgtaccgcag ggcacagatg cagatcgaca agatcctgga ccccacggcc agcgtgccct
1381 ccgtgttcat agagcccagg aagagctcac ggataaaacg ttctcccaag cctcgccgga
1441 aacaccaggt caacggctgt cctgccgacg ctgagaagga ccggctcatc accacagaca
1501 gcgatggcac ctacaggagg ccccccggcg tccacaactc agcctacatc ggatgcccat
1561 cggatcctga cctcccagcc gatgtgcaga caccatcctc ggtggaactg gggaggtatc
1621 cagcccttcc cttcccggcc tcccagtaca tcccacccca gccgtccatc gaggaggcac
1681 gccagaccat gcactccctc ctggacgacg cctttgccct cgtggccccc agcagccagc
1741 ctgccagcac cgcaggtgta ggccccggag tcccacccgg cctgcccgca aacagcaccc
1801 cttcccagga agagaggcga gccacccagt gggggtcctt ctacagccca gcccagacgg
1861 ccaacaatcc ctgcagtaga tacgaagact atggaatgac tcccccgacg ggtccattgc
1921 caagaccagg ttttggcccc ggtttgctgc agtctacaga gctggtgccc cctgaccctc
1981 agcagccaca ggcctccgcc gaagccccat ttgctgccag agggatctac tcggaggaga
2041 tgccgtcggt ggcccggcct cggcctgtcg ggggtaccac aggctcccag atccagcacc
2101 tgacacaggt ggggattgcc agcagaattg gagctcagcc agtggaaatc ccgccaagca
2161 gaggcagcca gtatgggggg ccaggctggc cttcgtacgg ggaggacgaa gcggggcgaa
2221 gagaggccac acacatgctc ggacatcaag agtattcttc ttcaccgcta tttcaggtgc
2281 caaggacttc aggcagggag ccctcagctc cttccgggaa cctcccccac cggggactgc
2341 agggccctgg gctgggttac cccaccagct ccacggaaga cctccagcct ggccactcct
2401 cggcctctct catcaaagca atccgcgagg agctcctccg gctctcccag aaacagagca
2461 ccgtgcagaa cttccacagc tgatcggcct cgcctcgcag atttgccaag tatccgcttc
2521 ctgtggaagc aagaccaaaa ggaaatcaac tgagtgggtg tttggaagag gaaggagcaa
2581 ctctcgggca gcctgcccaa gggagggagc aagttgcaat ttagaagatg ccatacgtcg
2641 tgtgacagct catgagcctt tcactgggct ggcaattgtc tgaacacttg ggttcagttg
2701 aaatatatgt attttggcca aaagccagca gcacttcaca aaaacaaaac acaaacctaa
2761 gctaacaaaa tgactgcatt cgtctctttt ttaaaggtag agattaaact gtatagacag
2821 catagggatg aaaggaacca agcgtttctg tgggattgag actggtacgt gtacgatgaa
2881 cctgctgctt tgttttctga gaagaggttt gaagacattt tattaacagc ttaatttttc
2941 tcttttactc cataggaact tattttaata gtaacattaa caacaagaat actaagactg
3001 tttgggaatt ttaaaaagct actagtgaga aaccaaatga taggttgtag agcctgatga
3061 ctccaaacaa agccatcacc cgcattcttc ctccttcttc tggtgctaca gctccaaggg
3121 cccttcacct tcatgtctga aatggaactt tggctttttc agtggaagaa tatgttgaag
3181 gtttcatttt gttctagaaa aaaaaaaaaa aa
//