LOCUS BC038116 5303 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens KN motif and ankyrin repeat domains 1, mRNA (cDNA
clone MGC:43128 IMAGE:5261060), complete cds.
ACCESSION BC038116
VERSION BC038116.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5303)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5303)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC038116.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: d Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 59859876.
FEATURES Location/Qualifiers
source 1..5303
/db_xref="H-InvDB:HIT000095101"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43128 IMAGE:5261060"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..5303
/gene="KANK1"
/gene_synonym="KANK"
/db_xref="GeneID:23189"
/db_xref="HGNC:HGNC:19309"
/db_xref="MIM:607704"
CDS 790..4374
/gene="KANK1"
/gene_synonym="KANK"
/codon_start=1
/product="KN motif and ankyrin repeat domains 1"
/protein_id="AAH38116.1"
/db_xref="GeneID:23189"
/db_xref="HGNC:HGNC:19309"
/db_xref="MIM:607704"
/translation="METRRRLEQERATMQMTPGEFRRPRLASFGGMGTTSSLPSFVGS
GNHNPAKHQLQNGYQGNGDYGSYAPAAPTTSSMGSSIRHSPLSSGISTPVTNVSPMHL
QHIREQMAIALKRLKELEEQVRTIPVLQVKISVLQEEKRQLVSQLKNQRAASQINVCG
VRRRSYSAGNASQLEQLSRARRSGGELYIDYEEEEMETVEQSTQRIKEFRQLTADMQA
LEQKIQDSSCEASSELRENGECRSVAVGAEENMNDIVVYHRGSRSCKDAAVGTLVQMR
NCGVSVTEAMLGVMTEADKEIELQQQTIESLKEKIYGLEVQLRETTHDREMTKLKQEL
QAAGSRKKVDKATMAQPLVFSKVVEAVVQTRDQMVGSHMDLVDTCVGTSVETNSVGIS
CQPECKNKVVGPELPMNWWIVKERVEMHDRCAGRSVEMCDKSVSVEVSVCETGSNTEE
SVNDLTLLKTNLNLKEVRSIGCGDCSVDVTVCSPKECASRGVNTEAVSQVEAAVMAVP
RTADQDTSTDLEQVHQFTNTETATLIESCTNTCLSTLDKQTSTQTVETRTVAVGEGRV
KDINSSTKTRSIGVGTLLSGHSGFDRPSAVKTKESGVGQININDNYLVGLKMRTIACG
PPQLTVGLTASRRSVGVGDDPVGESLENPQPQAPLGMMTGLDHYIERIQKLLAEQQTL
LAENYSELAEAFGEPHSQMGSLNSQLISTLSSINSVMKSASTEELRNPDFQKTSLGKI
TGNYLGYTCKCGGLQSGSPLSSQTSQPEQEVGTSEGKPISSLDAFPTQEGTLSPVNLT
DDQIAAGLYACTNNESTLKSIMKKKDGNKDSNGAKKNLQFVGINGGYETTSSDDSSSD
ESSSSESDDECDVIEYPLEEEEEEEDEDTRGMAEGHHAVNIEGLKSARVEDEMQVQEC
EPEKVEIRERYELSEKMLSACNLLKNTINDPKALTSKDMRFCLNTLQHEWFRVSSQKS
AIPAMVGDYIAAFEAISPDVLRYVINLADGNGNTALHYSVSHSNFEIVKLLLDADVCN
VDHQNKAGYTPIMLAALAAVEAEKDMRIVEELFGCGDVNAKASQAGQTALMLAVSHGR
IDMVKGLLACGADVNIQDDEGSTALMCASEHGHVEIVKLLLAQPGCNGHLEDNDGSTA
LSIALEAGHKDIAVLLYAHVNFAKAQSPGTPRLGRKTSPGPTHRGSFD"
BASE COUNT 1480 a 1252 c 1404 g 1167 t
ORIGIN
1 agagcctctc tgtagagatg cttaaagtgc tagctttatt taaaaatcag ctggcaaagc
61 gggagtgaag aacacacatt ttcagaagat accggtttcc tgttttcatt aagaaaacag
121 ggaatgcgga acagctgagt gcggcggggg tggtgtcact gcagccggag ggagacctcg
181 ctggtgaaag ctcagcctat ggcatccgag cgtggccggc caagtttaca cgaatgttga
241 aacttctcct cacggggtga ggatcgaggg cgcccgaggc cgggtccggc tgagctggag
301 cgagctgtgc ggggcagcgc gggctggcgg ggagcgcggc gggcgccacg tggaaaagca
361 ggtgatattc tcagtggaga ccaggacaag gaacagaaag acccttactt tgtggagacc
421 ccatatggtt atcaactaga cttagatttc ctcaaatatg tggatgacat acagaaggga
481 agtaccatca aaagactgaa catccagaag aggcggaagc cgtccgtgcc atgcccagaa
541 cccaggacca catctggtca gcaaggtata tggacttcca ctgaatccct ctcatcctcc
601 aacagtgatg acaacaagca gtgccccaac ttcctcatag ccagaagtca agttacatca
661 actccaatct caaagccacc tcgccctctg gagacctcac tcccttttct taccatccca
721 gaaaatcgac agctgccacc tccctcacca caactcccaa agcataacct tcatgtcacc
781 aagacactga tggagacccg gagaagactg gaacaggaga gagccaccat gcagatgaca
841 ccgggtgagt tcagaaggcc caggctggcc agttttggag gcatgggcac cacaagctcc
901 ctcccttctt ttgtgggttc tggaaaccac aatcctgcca agcaccagct tcagaatgga
961 taccaaggta atggggatta tggtagctat gccccagctg ctcccaccac ttcctccatg
1021 gggagctcca tccgccacag ccccctgagc tcagggatct ccaccccagt gaccaacgtg
1081 agccccatgc acctgcagca catccgcgag cagatggcca ttgctctgaa acgcctgaag
1141 gagctggagg agcaggtgcg aaccatccct gtgctccagg taaagatctc tgtcttgcaa
1201 gaagagaaaa ggcagttggt ctcacagctg aaaaaccaaa gggctgcatc ccagatcaat
1261 gtctgtggtg tgaggaggcg gtcctatagt gcggggaacg cctcccagct ggaacagctc
1321 tcccgggccc gaagaagtgg cggggaatta tacattgact atgaggagga agaaatggag
1381 acggtagaac agagcacgca gaggataaag gagttccggc aacttacagc agacatgcaa
1441 gccctggagc agaagatcca ggacagcagc tgtgaggcct cctcagagct cagggagaat
1501 ggagagtgcc ggtctgtggc tgtgggtgcc gaggagaaca tgaacgacat cgtcgtgtac
1561 cacagaggct ccaggtcctg taaggatgca gctgtaggga cacttgttca gatgagaaat
1621 tgtggggtca gcgtgacaga ggccatgctt ggagtgatga ctgaagctga caaagaaatt
1681 gagctgcaac agcagaccat agaatccttg aaggaaaaga tctatggcct agaagtacag
1741 cttagagaaa ccacccatga ccgggagatg actaaactga aacaagagct gcaggctgct
1801 ggatcgagga aaaaggttga caaagccacg atggcccagc cgcttgtttt cagtaaggtg
1861 gtggaggcag tggtgcagac cagagaccaa atggtcggca gtcacatgga cctggtggac
1921 acgtgtgttg ggacctccgt ggaaacaaac agtgtaggca tctcctgcca gcctgaatgt
1981 aagaataaag tcgtagggcc tgagctgcct atgaattggt ggattgttaa ggagagggtg
2041 gaaatgcatg accgatgtgc tgggaggtct gtggaaatgt gtgacaagag tgtgagtgtg
2101 gaagtcagcg tctgcgaaac aggcagcaac acagaggagt ctgtgaatga cctcacactc
2161 ctcaagacaa acttgaatct caaagaagtg cggtctatcg gttgtggaga ttgttctgtt
2221 gacgtgaccg tctgctctcc aaaggagtgc gcctcccggg gcgtgaacac tgaggctgtt
2281 agccaggtgg aagctgccgt catggcagtg cctcgtactg cagaccagga cactagcaca
2341 gatttggaac aggtgcacca gttcaccaac accgagacgg ccaccctcat agagtcctgc
2401 accaacactt gtctaagcac tttggacaag cagaccagca cccagactgt ggagacgcgg
2461 acagtagctg taggagaagg ccgtgtcaag gacatcaact cctccaccaa gacgcggtcc
2521 attggtgttg gaacgttgct ttctggccat tctgggtttg acaggccatc agctgtgaag
2581 accaaagagt caggtgtggg gcagataaat attaacgaca actatctggt tggtctcaaa
2641 atgaggacta tagcttgtgg gccaccacag ttgactgtgg ggctgacagc cagcagaagg
2701 agcgtggggg ttggggatga ccctgtaggg gaatctctgg agaaccccca gcctcaagct
2761 ccacttggaa tgatgactgg cctggatcac tacattgagc gtatccagaa gctgctggca
2821 gaacagcaga cactgctggc tgagaactac agtgaactgg cagaagcttt cggggaacct
2881 cactcacaga tgggctccct caactctcag ctcatcagca cactgtcgtc tatcaactct
2941 gtcatgaaat ctgcaagcac tgaagagctg aggaaccctg acttccagaa aaccagtctg
3001 ggtaaaatca caggcaatta tttgggatat acctgtaagt gtgggggcct tcagtcagga
3061 agtcccttaa gctcccagac atcccagcct gagcaagaag tggggacctc agaaggaaag
3121 ccaatcagca gcctggatgc cttccccact caggaaggta cgctgtctcc agtgaacctg
3181 acagacgacc agatcgccgc tggcctctat gcatgtacaa acaatgaaag tacactgaag
3241 tccatcatga agaagaaaga tggtaacaaa gattcaaatg gcgcaaaaaa gaatcttcag
3301 tttgttggca ttaatggagg gtatgaaaca acttcaagtg atgattccag ctcagatgaa
3361 agctcttctt ccgagtcaga tgacgagtgt gatgtcattg agtatcctct tgaagaagag
3421 gaggaggagg aggatgaaga cactcgggga atggcagaag ggcaccatgc agttaatatt
3481 gaaggtttga agtctgccag ggtggaagat gaaatgcagg ttcaagaatg tgaacctgag
3541 aaggtggaaa tcagagagag gtatgaatta agtgaaaaga tgttgtctgc atgcaactta
3601 ctgaaaaata ctataaatga ccccaaagct ttgaccagca aagatatgag gttctgtctg
3661 aacaccctcc agcacgagtg gttccgcgtg tccagtcaga agtcagccat tccagccatg
3721 gtgggggact acatagctgc ttttgaggcc atttccccag atgtcctccg ctatgtcatc
3781 aacttggcag acggcaacgg caacacagcc ctccattaca gcgtgtccca ctccaacttc
3841 gagattgtga agctgctgtt agatgccgat gtgtgtaatg tggatcacca gaacaaggca
3901 ggctacaccc ccatcatgtt ggcggccctc gccgctgtgg aagcagagaa ggacatgcgg
3961 attgtggaag aactctttgg ctgtggggat gtgaatgcca aagctagtca ggcgggacag
4021 acggccctca tgctggcggt cagtcacgga cggatagaca tggtgaaggg ccttctggcc
4081 tgtggggctg atgtcaacat ccaggatgac gagggctcca cggccctcat gtgtgccagc
4141 gagcacgggc acgtggagat tgtcaagctg ctgctggccc agcccggctg caacggtcac
4201 ctagaggaca acgatggcag cactgcgctc tcaatcgccc tggaagcagg acacaaggac
4261 atcgctgttc ttctgtatgc ccatgtcaac tttgcaaaag cccagtctcc gggcacccct
4321 aggcttggaa ggaagacgtc tcctggcccc acccaccgag gttcatttga ttgattgtat
4381 gcaaatagcc ctttatttac atgccactat taagctgcta attgttcctg ttggggtgac
4441 agatactgaa tgtatacgta ttgtgcctga gctcaccagc aaacagaagc atcaagccca
4501 ggggtaaagg ctgaagcttt cacagtgcag agactgctag cctgggcaca cacacctcct
4561 ttctggccgt cttctgtgta gggcacactt taacccagtc tctgttgctg ttgagtctct
4621 gctccgtttt gtacagtcac agggaattct gatctgaagg ggcaccttct gttcactccc
4681 acaaagtggt gtctggttct cactgagacg ttttaagatt tttccacaaa tatttatatg
4741 tactaaatgt ggaaccatta gaaagttctt ccaaaatctc attccagcat agttttggat
4801 ttttcttttg tcttatttta aaataaggaa gtcgagatga ctttgatcat tggtaacttg
4861 ggcctgggcc agacaaagta taaaacttac aaaagaatat tctcatttgg tcttaactag
4921 gtagatgtaa tatatgactt tttataaaaa gggtatctat atgaacttga cacagtattt
4981 tcagcttttg tattccatac taaagccatg aagaactaca cgtaacatca tcatttgtat
5041 taattgcaca actccaatgc taaaggttgg attgtgttag aggaatcggc tctgtatttg
5101 cctctagaga aacacagtgt tctctttgta tttatggatt cctttttacc gtgtcacatt
5161 tactttggtc ctctatgtat ttaaatgttt gaagtgcctt agactcttgc catattttca
5221 aaataaaatt ccattaagct ctaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaagaaa
5281 aaaaaccaaa aaaaaaaaaa aaa
//