LOCUS BC037322 3479 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ligand dependent nuclear receptor corepressor-like,
mRNA (cDNA clone MGC:43101 IMAGE:5260413), complete cds.
ACCESSION BC037322
VERSION BC037322.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3479)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3479)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: c Column: 5.
FEATURES Location/Qualifiers
source 1..3479
/db_xref="H-InvDB:HIT000094795"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:43101 IMAGE:5260413"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3479
/gene="LCORL"
/gene_synonym="FLJ30696"
/gene_synonym="MLR1"
/db_xref="GeneID:254251"
/db_xref="HGNC:HGNC:30776"
CDS 8..964
/gene="LCORL"
/gene_synonym="FLJ30696"
/gene_synonym="MLR1"
/codon_start=1
/product="ligand dependent nuclear receptor
corepressor-like"
/protein_id="AAH37322.3"
/db_xref="GeneID:254251"
/db_xref="HGNC:HGNC:30776"
/translation="MDKGRERMAAAAAAAAAAAAAAQCRSPRCAAERRGFRRELDSWR
HRLMHCVGFESILEGLYGPRLRRDLSLFEDCEPEELTDWSMDEKCSFCNLQREAVSDC
IPSLDSSQSTPTEELSSQGQSNTDKIECQAENYLNALFRKKDLPQNCDPNIPLVAQEL
MKKMIRQFAIEYISKSGKTQENRNGSIGPSIVCKSIQMNQAENSLQEEQEGPLDLTVN
RMQEQNTQQGDGVLDLSTKKTSIKSEESSICDPSSENSVAGMLQVKTDEKLNVSDENT
ASCPLSPIKMCLNRPIEWNLNLTTASLTSCTVHNQNLKSEEK"
BASE COUNT 1115 a 636 c 637 g 1091 t
ORIGIN
1 agcggagatg gacaagggaa gagagagaat ggccgctgcc gccgccgctg ctgccgccgc
61 cgccgccgcc gctcagtgcc ggagccctcg gtgcgcggcg gagagaagag gattccggcg
121 ggaactcgac tcttggcgcc accgcctcat gcactgtgta ggttttgaga gtattttaga
181 agggctttat ggaccacggc tacgaagaga cctcagttta tttgaagact gtgaaccaga
241 agagctgact gactggtcta tggatgaaaa atgttcattt tgtaacctac agagagaagc
301 agtcagtgat tgtataccat ctcttgattc ttcacagtca acaccaacag aggagctatc
361 atctcagggc cagtccaaca ctgataagat tgaatgccaa gcagaaaatt acctaaatgc
421 actctttcga aagaaagatc ttcctcagaa ctgtgatcct aacattcccc tagttgctca
481 ggaattaatg aaaaagatga tacgtcaatt tgcgattgag tacatttcaa aaagtggtaa
541 aactcaagag aatagaaatg gttcaattgg accaagtata gtatgtaaaa gtatccaaat
601 gaatcaagca gaaaactccc ttcaggaaga gcaggaaggc cccttagacc tcactgtgaa
661 tcgaatgcaa gaacaaaata ctcagcaagg ggatggagtg ttagatctct ctacaaagaa
721 aaccagcata aaatctgaag agtcatccat atgtgatcct tcttctgaaa attcagtggc
781 tggcatgcta caagtgaaaa ctgatgagaa actgaatgtg tctgatgaga atacagcaag
841 ttgccctttg agccccatta agatgtgcct taatcgtccc attgaatgga atctgaattt
901 gacaacagca tctctaacga gctgtacagt tcataaccaa aatctcaaaa gcgaagagaa
961 atagattgca gttcttcttg cactatcttt attttgtatg tcagtattcc ttctgaacaa
1021 taagcattta tcaattgatc ttgaagtatt tctagtcctg tgatttgtct ttatattaaa
1081 tcattagcat taatcatttt gattatattc tttatatgtt tttttacatg ttttacatca
1141 gatcattgtg gaattttgta aacggatttt gatgtttctc ttttagtggt attatgtgaa
1201 ttttttatgc cctaagttta aatacgtaat tgtccctagt tttatttctg tgcacaaagt
1261 tttaatatat aacacattgt gatttataaa gctagtattg taaagatttg tgatgataac
1321 ctgacccatg agcagttgta aaacaggtgg ataccaacta cctcgaagca aattggtgaa
1381 agaaaaggca aaggtatctc ttagaagtaa atctccttca acgttatata tgtacagaag
1441 aaaaaaagtt gatcatagct ttttgtcaag tagcatgttt cccattcaca ggaaaatgtg
1501 agcttatcag ttctttctct gtattttaaa tctaagtctg tgggctttaa gagcaatggc
1561 acaattgcat gtttactgtt cagcaaatct gtgcctcttg atagagaaaa atactatgtg
1621 gtttctgtaa gttaccagtt ttgaatgaaa aatggtaaat ggatttacat ctgttttatt
1681 gtaccttagc cttttatttt aaagttaaag ggatgacttt taaaagcagg acattcccta
1741 cctttaatag tgcaaagcac agtttcagca atggctacat gactatgtct aaaaactgaa
1801 tactcagaat actaaaggtt tggtgcttaa atttattttt cccatgccag agaaagcaag
1861 ctttggtatg gtaaaccaca tgagaacatg gctcctttct ttttggatag cctggccatg
1921 tgtgaatggg attttagctt attatgtttc taagactttt ccttacagca cacttaatgt
1981 accttttcag tccttctccc aaccccctgc aaattgtctt taaaacaaca acacataagg
2041 aatctgaagc acaggagaac acagagccaa caaacagaat gaagaacaat catctatttt
2101 taactgactt tctatcatta ccatttttcc ttttgcttaa taactatctt gctttgaaac
2161 tttgactcct tttataagtt ctatgaggca catatgtata gcaatttggt tctaaaaacc
2221 agtgatctta ctttagctcc atcttaaaat ttcaccttaa gtaaatggcc tctagtagat
2281 gataagccta aaaaaagcac aattattaaa acaaacagat ccatgttagg acatttctga
2341 ataataaaga gaaaaggtgt ttcgttgggt attgcagaaa agaggaccaa tttcatatag
2401 tacaagtttc gtaagtcagg ccaagtgtca atttcaaaag acaagaaatg aaattgacag
2461 tgaatagtgc tcataaattg gtagcgtata taaagagaag ttcctgtcac attatattcc
2521 cactagaatt attatccaca gtaaataaat attattttgt tatgccaaaa atatagcgag
2581 cagcttcatg gttaataata catttatgtt gacacctccc taatccagga aacattcaca
2641 aacaaggact cccatataca aatactttag gaagagagat ttcccaggca gatatcacca
2701 aaaatgtttt cactgtagga atcacaaaat aagtttttgt caaaataact gttgttgaac
2761 gttatactgg tcttcctcac tggtgattga taagctcctt tctagccagt ttgtggtact
2821 tccttcattt tccctagaaa tgttacttgt taaatgtgtc ctcaggcggt ttcatctttg
2881 ttgattctgc ccatctaagt cataagcttc tcaaatgcaa gctactagct agttacactt
2941 gtaagttttc cataatgaca tgattttaaa cataaagagt tcataagaat cacttggaga
3001 gactatttaa aaatgagatt cctaggccca cctcagattg tgataaatct gtgtgactga
3061 ctgatgcaca ctttttctgg actataataa ctgatgctgc tctactgctt taatacaggc
3121 caaagtaacg tggaagcgca cagcagaaaa tcttcagaaa gacatcaggt ttgttctgat
3181 tttgacaagg gtaacttctt ctttattaaa gcaaataact ggacataatc ttaaaggatt
3241 ccacctccat cgtctttcct aacttagatc ttcattgaga aattgggcaa ggttaagttt
3301 acttttttct agtgctgcgg ttttggctcg tcttggtagt ctcatcttca tttctgattc
3361 tggttctgga acttcatgat cactaaatag atgttgaaaa tacacgaatt tagatacaag
3421 ctttaaaacc agtttattta taaataaaac ttttttgttt ctgaaaaaaa aaaaaaaaa
//