LOCUS BC037312 1691 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens activating transcription factor 7 interacting protein,
mRNA (cDNA clone IMAGE:5261243), partial cds.
ACCESSION BC037312
VERSION BC037312.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1691)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1691)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC037312.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 73 Row: d Column: 3.
FEATURES Location/Qualifiers
source 1..1691
/db_xref="H-InvDB:HIT000094786"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5261243"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..>1691
/gene="ATF7IP"
/gene_synonym="FLJ10139"
/gene_synonym="FLJ10688"
/gene_synonym="MCAF"
/gene_synonym="p621"
/db_xref="GeneID:55729"
CDS 140..>1691
/gene="ATF7IP"
/gene_synonym="FLJ10139"
/gene_synonym="FLJ10688"
/gene_synonym="MCAF"
/gene_synonym="p621"
/codon_start=1
/product="ATF7IP protein"
/protein_id="AAH37312.1"
/db_xref="GeneID:55729"
/translation="MDSLEEPQKKVFKARKTMRVSDRQQLEAVYKVKEELLKTDVKLL
NGNHENGDLDPTSPLENMDYIKDKEEVNGIEEICFDPEGSKAEWKETPCILSVNVKNK
QDDDLNCEPLSPHNITPEPVSKLPAEPVSGDPAPGDLDAGDPASGVLASGDSTSGDPT
SSEPSSSDAASGDATSGDAPSGDVSPGDATSGDATADDLSSGDPTSSDPIPGEPVPVE
PISGDCAADDIASSEITSVDLASGAPASTDPASDDLASGDLSSSELASDDLATGELAS
DELTSESTFDRTFEPKSVPVCEPVPEIDNIEPSSNKDDDFLEKNGADEKLEQIQSKDS
LDEKNKADNNIDANEETLETDDTTICSDRPPENEKKVEEDIITELALGEDAISSSMEI
DQGEKNEDETSADLVETINENVIEDNKSENILENTDSMETDEIIPILEKLAPSEDELT
CFSKTSVLPIDETNPDLEEKMESSFGSPSKQESSESLPKEAFLVLSDEEDISGEKDES
EVISQKKKK"
BASE COUNT 538 a 319 c 369 g 465 t
ORIGIN
1 agtctcacac agtaagtttc ctgggagagt tggaattcaa atctgtgaat ctgtctacag
61 tctacagagt tcatgttctt aattgggtta ttaaaagtga tgaatttttt taaaggaatg
121 cttactttta atattcagaa tggacagttt agaagaacct cagaaaaaag tctttaaggc
181 tcgaaaaacg atgagagtga gtgatcgtca gcaacttgaa gcagtgtaca aggtcaaaga
241 agaactgttg aaaactgatg tcaagctgtt aaatggcaac catgaaaatg gagatttgga
301 cccaacctca cctttggaaa acatggatta cattaaagac aaggaagagg tgaatggcat
361 tgaagagatt tgttttgatc ctgaaggaag taaagcagaa tggaaggaaa caccctgtat
421 cctaagtgtt aatgtaaaaa acaagcagga tgatgattta aattgtgaac ctttgtctcc
481 ccataatata actccagaac cagtctctaa actgcctgct gaaccagttt ctggtgatcc
541 agcccctggt gatctggatg ccggagatcc agcctccgga gtactggcct ctggtgattc
601 cacctctggt gatcccacct ctagcgagcc ctcctctagt gatgctgcct ctggtgatgc
661 aacctctggt gatgcccctt ctggtgatgt gtcccctggt gatgccacct ctggtgatgc
721 cactgctgat gatctctcct ctggtgatcc cacctctagt gatcccatcc caggtgaacc
781 ggtccctgtt gaacccattt ctggtgattg tgccgctgat gatatagcct ctagtgaaat
841 aacttctgtt gatctggctt ctggagcacc agcttccact gatccagcct ctgatgatct
901 ggcctctggt gatctatcct ctagtgaact ggcctctgat gatctggcca ctggtgaact
961 ggcctctgat gagctgactt ctgaatcaac ctttgatcgt acctttgaac caaagtctgt
1021 accagtttgt gaaccagttc ctgaaattga caatatagaa ccaagtagca ataaagatga
1081 tgattttctt gaaaaaaatg gagctgatga aaaattagag caaattcaga gtaaagactc
1141 attggatgag aaaaataaag ctgataataa tattgatgct aatgaagaaa ctctagaaac
1201 agatgataca actatttgtt cagatcgacc tcctgaaaat gaaaagaagg tagaggaaga
1261 tattatcaca gagcttgctc ttggagaaga tgctatatct agcagtatgg aaattgacca
1321 aggtgaaaag aatgaagatg aaacttctgc agatcttgta gaaacgatta atgaaaatgt
1381 tattgaagat aacaaaagtg agaatatctt agaaaataca gactctatgg agacagatga
1441 aatcattcct attttggaaa agcttgcacc ttctgaggat gaacttactt gcttttctaa
1501 aacatctgtc cttccaatcg atgagacaaa tccagatttg gaagagaaaa tggaaagttc
1561 ttttggttca ccatctaaac aagaaagtag tgagagtttg ccaaaagaag cctttctggt
1621 cctctctgat gaagaggata tttcgggtga aaaagatgag tctgaagtta tatcgcaaaa
1681 aaaaaaaaaa a
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