LOCUS BC037284 4285 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens retinoblastoma binding protein 5, mRNA (cDNA clone
MGC:33095 IMAGE:5266066), complete cds.
ACCESSION BC037284
VERSION BC037284.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4285)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4285)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC037284.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: j Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4826969.
FEATURES Location/Qualifiers
source 1..4285
/db_xref="H-InvDB:HIT000051886"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33095 IMAGE:5266066"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4285
/gene="RBBP5"
/gene_synonym="RBQ3"
/db_xref="GeneID:5929"
/db_xref="MIM:600697"
CDS 103..1605
/gene="RBBP5"
/gene_synonym="RBQ3"
/codon_start=1
/product="RBBP5 protein"
/protein_id="AAH37284.1"
/db_xref="GeneID:5929"
/db_xref="MIM:600697"
/translation="MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCN
DGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQ
RFRFPSPILKVQYHPRDQNKVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFD
RRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTA
DRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHAL
YIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAP
DFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEE
LEDSKALLYLPIAPEVEDPEENPYGPPPDAVQTSLMDEGASSEKKRQSSADGSQPPKK
KPKTTNIELQGVPNDEVHPLLGVKGDGKSKKKQAGRPKGSKAGGAISELL"
BASE COUNT 1204 a 861 c 982 g 1238 t
ORIGIN
1 agtctcttcg cggcgtccac cacttagacg caagttgctg aagccggccg gggagaaggt
61 gttgttgccg gagctgagac cgggcggcca cagtccgcag ggatgaacct cgagttgctg
121 gagtcctttg ggcagaacta tccagaggaa gctgatggaa ctttggattg tatcagcatg
181 gctttgactt gcacctttaa caggtggggc acactgcttg cagttggctg taatgatggc
241 cgaattgtca tctgggattt cttgacaaga ggcattgcta aaataattag tgcacacatc
301 catccagtgt gttctttatg ctggagccga gatggtcata aactcgtgag tgcttccact
361 gataacatag tgtcacagtg ggatgttctt tcaggcgact gtgaccagag gtttcgattc
421 ccttcaccca tcttaaaagt ccaatatcat ccacgagatc agaacaaggt tctcgtgtgt
481 cccatgaaat ctgctcctgt catgttgacc ctttcagatt ccaaacatgt tgttctgccg
541 gtggacgatg actccgattt gaacgttgtg gcatcttttg ataggcgagg ggaatatatt
601 tatacgggaa acgcaaaagg caagattttg gtcctaaaaa cagattctca ggatcttgtt
661 gcttccttca gagtgacaac tggaacaagc aataccacag ccattaagtc aattgagttt
721 gcccggaagg ggagttgctt tttaattaac acggcagatc gaataatcag agtttatgat
781 ggcagagaaa tcttaacatg tggaagagat ggagagcctg aacctatgca gaaattgcag
841 gatttggtga ataggacccc atggaagaaa tgttgtttct ctggggatgg ggaatacatc
901 gtggcaggtt ctgcccggca gcatgccctg tacatctggg agaagagcat tggcaacctg
961 gtgaagattc tccatgggac gagaggagaa ctcctcttgg atgtagcttg gcatcctgtt
1021 cgacccatca tagcatccat ttccagtgga gtggtatcta tctgggcaca gaatcaagta
1081 gaaaactgga gtgcatttgc accagacttc aaagaattgg atgaaaatgt agaatacgaa
1141 gaaagggaat cagagtttga tattgaagat gaagataaga gtgagcctga gcagacaggg
1201 gctgatgctg cagaagatga ggaagtggat gtcaccagcg tggaccctat tgctgccttc
1261 tgtagcagtg atgaagagct ggaagattca aaggctctat tgtatttacc cattgcccct
1321 gaggtagaag acccagaaga aaatccttac ggccccccac cggatgcagt ccaaacctcc
1381 ttgatggatg aaggggctag ttcagagaag aagaggcagt cctcagcaga tgggtcccag
1441 ccacctaaga agaaacccaa aacaaccaat atagaacttc aaggagtacc aaatgatgaa
1501 gtccatccac tactgggtgt gaagggggat ggcaaatcca agaagaagca agcaggccgg
1561 cctaaaggat caaaagcagg aggagcaatc tcagaactgt tatgaagacc ttcgaagttc
1621 ttcattcttt ctcactttgc catcatgtgg cctctggaca ctgtggtcag tcatttgaaa
1681 attgacttta atttaaaaca aaggcctgtg cctcccaccc aggaggtggg agggtgaatt
1741 ttatgtttaa atgaagaagt gaattatgga agaagagtat acgaccttcc cttccctttc
1801 aagcataagt ccaaatagac tctcaggaat gaagatttgt gaagacatca gataggaatt
1861 ttgactcatt taaactttga tgcttagtta tgttgctgga gaaaagatac ttatgttttg
1921 ctcatctaac ttcattgtac ccagcgtcat tttgacatgt catttcctat ctcccatttg
1981 ccttcggtcc tcaatgcatg tctttgagtg acttcttatc tgaaattttg ctactggtat
2041 cctaggaaag cttttgttgg atactctcat tttaaacttc tcctctcccc agatacctcc
2101 tatatttcca tattgtgtgc aaaggatggg cagaaaagaa agtgcttgaa agatttcaaa
2161 ttttcagaaa gggaacaacg aaggccctct cttcctctca taccacgttt tgctcaagaa
2221 gctgggctgt aacaattcag ggttttccct tgttttcctc tcattgcatg tttccctcca
2281 atattggttc attgtcatca atcatggttt ttgaagatag ctagttttat ccatctacag
2341 caaagaatca tcaatagttt atattgcttt acctgtgctg gcttccagag atggaaacaa
2401 acccaggtgt ctctcaacaa gctacttttt tactggggtg ggggaatcta tgcaaggagt
2461 aaagtaaaac catccagaat caaagcagca accacatagt tcaaatcaaa gatcaaggtg
2521 aattttttgt atcactgcct gtggaaatct atcctcatca gtcattgcat ttttccctgc
2581 ctatacctgt gctccttttt cttactgtgt tttcagtcac ttcctttctg tgaaaggttg
2641 cttagctttt ttttgacatt tgttgttctt tatataaaaa taacagattg gatagatgtg
2701 tacatttggt gtttgaaatt ctctgaaaat cccattagga aaccaggtgt gaaaagggct
2761 cagtagcttc tctgagtggc gtttttagct gactggaagt gcttaatctg gatcgtcttt
2821 tttttttttt ttttttttca atattttaaa aggagaattt aaatactgtg cttactgtga
2881 aatatatcag ttggtgagcc gggcgtggtg ggtcacgcct gtaatcccag cactttggga
2941 ggccaaggcg ggttgatcac ccgaggtcag gagttcaaga ccagcctggc caacatggtg
3001 aaagcctgta tctattaaaa gacaaaaatt agctgggcgt ggtggtacat gcctgtaatc
3061 ccagctacac tggaggctga gtcaggagaa tcacttgaac gtgggaggca gaggttgcag
3121 tgagtggaga tcgcaccact gccctccagc ctaggtgaca gaatgagact ctatctcaaa
3181 aaaaaaaaaa aatgatatca gttggtggat gctcctatag gtagccaaac acattgatta
3241 cctgttagat tttaggatag aaatcaaagt agagcacgtc agcaagagcc tctttgtctc
3301 actccatcat ttaaaaccag tatattcagt agttgaagaa agagctctcc ctgagtcagt
3361 tgcaaaacgt ctatattttt agatgccact acttttttct taaatattca ttttgagact
3421 gtcatgagtt agaccagtgg ttgagattag tagatggctc actagacatg tttttgtttt
3481 gcagacatta tatccattcc agtcctctgc actgtacact gcagcagtgt gcaaactatg
3541 ggacttagag ggtttctgcc atctttccat gtgtgaagta gcttggtttc ctctgcctgt
3601 gcatttggat gtttgtgcta tgtccacctc ctaaactggc tactgagaaa atcatcttca
3661 gccctgtcag attgtctctg gcagtagctc ctaataatta tttatgtttt tggaattttt
3721 ttttcaactt ttaaaaaaac cttctatcca tttcaatttg aattatttga tttgtacaat
3781 atatgtatat tctcttcttc ctttttgtca tccctgccct gccaccccca aaattttgtt
3841 tttaaaaata ttctgggctg ggcatggtgg ctcacacctg taatcccagc acttggggag
3901 gccgaggctg gtggatcatc tgaggtcagg tgtttgagac cagcctggtc aacatggtga
3961 aaccccgtct ctactaaaaa tacaaaaatt agctgggcgt ggtggcgggc acctgtaatc
4021 ctagctactc gggaggctga ggcaggagaa ttgcttgaat ccaggaggca gaggttgcag
4081 tgagctgaga ttgcgccact gcactccagc ctgggtgaca gagcaagact ccatctcaaa
4141 aaaaaaaaaa aaaaaaatct gtagttttgt acaagatgag acttagcctt gggtacttct
4201 tgctgaagct ttaatgcttt gtaaataaaa tcggatgttt attaaaaaaa aaaaaaaaaa
4261 aaaaaaaaaa aaaaaaaaaa aaaaa
//