LOCUS BC036925 1530 bp mRNA linear HUM 08-JUL-2008
DEFINITION Homo sapiens harbinger transposase derived 1, mRNA (cDNA clone
MGC:46493 IMAGE:5225925), complete cds.
ACCESSION BC036925
VERSION BC036925.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1530)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1530)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 78 Row: h Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31341135.
FEATURES Location/Qualifiers
source 1..1530
/db_xref="H-InvDB:HIT000051849"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46493 IMAGE:5225925"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1530
/gene="HARBI1"
/db_xref="GeneID:283254"
/db_xref="HGNC:HGNC:26522"
CDS 181..1230
/gene="HARBI1"
/codon_start=1
/product="harbinger transposase derived 1"
/protein_id="AAH36925.1"
/db_xref="GeneID:283254"
/db_xref="HGNC:HGNC:26522"
/translation="MAIPITVLDCDLLLYGRGHRTLDRFKLDDVTDEYLMSMYGFPRQ
FIYYLVELLGANLSRPTQRSRAISPETQVLAALGFYTSGSFQTRMGDAIGISQASMSR
CVANVTEALVERASQFIRFPADEASIQALKDEFYGLAGMPGVMGVVDCIHVAIKAPNA
EDLSYVNRKGLHSLNCLMVCDIRGTLMTVETNWPGSLQDCAVLQQSSLSSQFEAGMHK
DSWLLGDSSFFLRTWLMTPLHIPETPAEYRYNMAHSATHSVIEKTFRTLCSRFRCLDG
SKGALQYSPEKSSHIILACCVLHNISLEHGMDVWSSPMTGPMEQPPEEEYEHMESLDL
EADRIRQELMLTHFS"
BASE COUNT 450 a 330 c 362 g 388 t
ORIGIN
1 gggaagtgtg gctggtaacc tggcagccgc ggagagagag aagattataa atggcagagc
61 catttaactg tggttagctg ttggattctg atactttctt aaaaatacgt tcttgcacca
121 acatcttcat tgggaacagt tcagaaaaag caaagaggag agccaacatt cacatttacc
181 atggctatac caataacagt gcttgactgt gacctcttgc tatatggccg tggtcaccgg
241 acattggacc gttttaagct ggatgatgtg actgatgaat acttgatgtc catgtatggg
301 tttccacggc agttcattta ttacttggtg gagctcttgg gggcgaatct ttctaggcct
361 actcagcgat ccagggctat tagcccagag acacaggtcc ttgcagcatt gggtttttat
421 acctcaggtt ccttccagac tcggatggga gatgccattg gaatcagtca ggcgtctatg
481 agtcgttgtg ttgccaatgt cactgaagca cttgtggaaa gggcctcaca gttcattcgc
541 tttccagctg atgaagcctc cattcaggct ctgaaggatg aattctatgg gttggcaggg
601 atgccagggg tgatgggggt ggttgactgt atccatgtgg ccatcaaggc accaaatgct
661 gaagacctct cctatgtgaa ccgaaaaggc ctgcattctt taaactgcct gatggtgtgt
721 gacattagag ggacactaat gaccgtggag acaaactggc ccggcagcct acaggactgt
781 gctgtgctgc agcagtcttc cctcagtagt cagtttgaag cgggtatgca caaagatagc
841 tggcttctgg gtgacagttc cttctttctt cgaacctggc tcatgacccc acttcacatt
901 cctgaaactc cagcagaata tcgctataac atggcccatt ctgcaactca cagtgtgatt
961 gagaagactt tccgaaccct ctgctcccga ttccgctgcc tggatggatc caagggggca
1021 ctgcagtact caccagagaa atccagccat atcatcttgg cctgttgtgt cctccacaac
1081 atctccctgg agcatgggat ggatgtttgg tcctctccaa tgacaggacc catggaacag
1141 cccccggaag aggagtatga gcacatggag tccctggact tagaggctga ccgtattcgt
1201 caggagctaa tgctcactca ttttagctaa tgtagaaggt ggagaggagg gatacttccc
1261 aggagttgtg acagactttc ctcctcatca ccttttacac agttccatca tctagcatga
1321 ctgagtatac agatacttgt cataaactga catttaatat gtgtgttttg gtaaggttgg
1381 ggctatgcca gaatatcttg attcatttgc atatgcatta attaaactga aaccaagaca
1441 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//