LOCUS BC036920 1570 bp mRNA linear HUM 30-JUN-2004
DEFINITION Homo sapiens chromodomain helicase DNA binding protein 8, mRNA
(cDNA clone IMAGE:5199722), partial cds.
ACCESSION BC036920
VERSION BC036920.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1570)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1570)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 78 Row: f Column: 16.
FEATURES Location/Qualifiers
source 1..1570
/db_xref="H-InvDB:HIT000094707"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5199722"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1570
/gene="CHD8"
/gene_synonym="HELSNF1"
/gene_synonym="KIAA1564"
/db_xref="GeneID:57680"
CDS <1..1048
/gene="CHD8"
/gene_synonym="HELSNF1"
/gene_synonym="KIAA1564"
/codon_start=2
/product="CHD8 protein"
/protein_id="AAH36920.1"
/db_xref="GeneID:57680"
/translation="TAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHKLMANGVMG
DGHPLFHKKKGNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTLLVGEDAPRRA
ELEMWLQGHPEFAVDPRFLAYMEDRRKQKWQRCKKNNKAELNCLGMEPVQTANSRNGK
KGHHTETVFNRVLPGPIAPESSKKRARRMRPDLSKMMALMQGGSTGSLSLHNTFQHSS
SGLQSVSSLGHSSATSASLPFMPFVMGGAPSSPHVDSSTMLHHHHHHPHPHHHHHHHP
GLRAPGYPSSPVTTASGTTLRLPPLQPEEDDDEDEEDDDDLSQGYDSSERDFSLIDDP
IMPANSDSSEDADD"
BASE COUNT 507 a 348 c 383 g 332 t
ORIGIN
1 cacagcggca gcccagttca ccaaacttcg ccgaggcatg gatgaaaagg agtttacagt
61 tcaaatcaaa gatgaggaag gattgaagtt aacattccag aagcacaagt tgatggcgaa
121 tggagtaatg ggagatggac atccactgtt tcataagaag aaggggaaca gaaagaagct
181 agtagagctg gaggtggagt gcatggaaga gcctaatcac cttgatgtgg acctggagac
241 ccggatccct gtcatcaata aggtggatgg tactttgctg gtgggtgagg atgcccctcg
301 ccgggctgaa ctggagatgt ggttacaggg tcatccagag tttgctgttg atccccgatt
361 tctagcgtat atggaggatc gcagaaaaca gaagtggcaa agatgtaaaa aaaataataa
421 ggcagaattg aactgtttgg gaatggaacc agtacagaca gctaactcta gaaatgggaa
481 aaagggtcat cacactgaaa cggtgttcaa ccgggttttg ccagggccta ttgcaccaga
541 gagcagcaag aagcgggccc gtaggatgcg accagacctt tctaagatga tggccctcat
601 gcagggtgga agcactgggt ctctatctct gcataacacg ttccaacaca gcagtagtgg
661 cctacagtct gtgtcatctt tgggtcacag cagtgccact tctgcatctt tgccttttat
721 gccatttgtg atgggtggtg caccatcatc ccctcatgta gactccagca ccatgcttca
781 tcaccaccac caccaccccc acccccacca tcaccaccat caccatccag gcttgagagc
841 ccctggctac ccctcttcac cagtgactac cgcctctggt actaccttgc ggttgccacc
901 actgcaacct gaggaggatg acgatgagga tgaagaagat gatgatgact tatctcaggg
961 ctatgatagc tcagaaaggg acttctcact cattgatgat cctattatgc cagctaactc
1021 agactccagt gaagatgctg atgactgaag ccccagcatg ggccccattg cttgggcggc
1081 tgctgtattt tcatttactc tggcccttgg actatggaaa cgtgggaggg gcaggggaga
1141 tgtggggaag tccaggactc caggaggtga aaaggaaaaa aaaaaaaaaa tgtacctgat
1201 tgctcccaat tatgagagga ttgggtgggc aggggaactc ctaaaataat acatgaccac
1261 ttcctcattt ctggggaagg aaaggagact agagcagctg gtgtgctcac ccctccctag
1321 tcacctccat taaccacaga ctatgtagcg ctggccctag cctctggcag agcctgttcc
1381 tggccgaact gtggatacag ctggagggtc aggaactgtt accttctttc cccttggcat
1441 taataaattt aagttaatcc ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa
//