LOCUS BC036567 1442 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens heat shock transcription factor, Y-linked 1, mRNA
(cDNA clone MGC:41763 IMAGE:5297256), complete cds.
ACCESSION BC036567
VERSION BC036567.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1442)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1442)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC036567.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 76 Row: n Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 50312660.
FEATURES Location/Qualifiers
source 1..1442
/db_xref="H-InvDB:HIT000051744_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41763 IMAGE:5297256"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1442
/gene="HSFY1"
/gene_synonym="HSF2L"
/db_xref="GeneID:86614"
/db_xref="HGNC:HGNC:18568"
/db_xref="MIM:400029"
CDS 101..1306
/gene="HSFY1"
/gene_synonym="HSF2L"
/codon_start=1
/product="heat shock transcription factor, Y-linked 1"
/protein_id="AAH36567.1"
/db_xref="GeneID:86614"
/db_xref="HGNC:HGNC:18568"
/db_xref="MIM:400029"
/translation="MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIE
EHAFQVLSQGSLLESPSYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENG
TCIVINEELFKKEILETKAPYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFL
SEEKESSVLSKLKFYYNPNFKRGYPQLLVRVKRRIGVKNASPISTLFNEDFNKKHFRA
GANMENHNSALAAEASEESLFSASKNLNMPLTRESSVRQIIANSSVPIRSGFPPPSPS
TSVGPSEQIATDQHAILNQLTTIHMHSHSTYMQARGHIVNFITTTTSQYHIISPLQNG
YFGLTVEPSAVPTRYPLVSVNEAPYRNMLPAGNPWLQMPTIADRSAAPHSRLALQPSP
LDKYHPNYN"
BASE COUNT 477 a 305 c 247 g 413 t
ORIGIN
1 agataagtgt acatgcttag gccttctgaa gcagcatttg aagctgcagt cctgaaaacc
61 atgcaggccg gaagagtaga taaagaaata tttatttgag atggcacatg tttcttcaga
121 aactcaagat gtttccccca aagatgaatt aactgcttca gaagcctcca ctaggtctcc
181 attgtgtgaa cacaccttcc ctggggactc agacttacgg tcaatgattg aagaacatgc
241 ttttcaggtt ttgtcacaag gatccttgtt agaaagtcca agttacacag tttgtgtctc
301 tgagccagat aaagatgatg attttctttc tctgaacttt cccaggaaac tttggaaaat
361 agtggaaagt gaccaattca agtctatttc atgggatgag aatggaactt gcatagtgat
421 taatgaagaa ctcttcaaga aagaaatttt ggaaacaaag gctccttaca gaatatttca
481 aactgatgct atcaaaagtt ttgttcgaca gctcaacctt tatggattta gtaaaattca
541 acagaatttt caaagatctg cctttctagc cacctttctg tcagaagaga aagaatcgtc
601 tgtcttaagc aagttaaagt tctattataa tccaaatttc aagcgtggct atccccaact
661 tttagtaaga gtgaagagaa gaattggtgt taaaaatgct tcacctatat ctactttatt
721 caacgaagat ttcaacaaga agcattttag agcaggggct aacatggaga atcataattc
781 tgccttagct gctgaagcta gtgaagaaag tttattttca gcctctaaaa atttaaatat
841 gcctctaaca agggaatctt ctgtcagaca gataattgca aattcatctg tccccattag
901 aagtggtttc cctcctcctt caccttcaac ctcagttgga ccatcagaac aaattgcaac
961 agatcaacat gctattttaa atcagttgac cactattcat atgcactctc atagtaccta
1021 catgcaagca aggggccaca ttgtgaattt tattacaacc acaacttctc aataccacat
1081 catatctccc ttacaaaatg gttattttgg gctgacagtg gaaccatctg ctgttcccac
1141 acgatatcct ctggtatcag tcaatgaggc tccatatcgt aacatgctac cagcaggcaa
1201 cccgtggttg caaatgccta cgatcgctga tagatcagct gcccctcatt ccaggctagc
1261 tcttcaacca tcaccactgg acaaatatca ccctaattac aactgatctg ccattaaaag
1321 aggaccagat tatgaatgac aacagagact aacatttaca ttgacaaaaa accctaaaaa
1381 tttctgcaat tatcttattg aacaataaaa ttgcatgttt acttccaaaa aaaaaaaaaa
1441 aa
//