LOCUS BC036540 2887 bp mRNA linear HUM 19-JUN-2008
DEFINITION Homo sapiens chromosome 13 open reading frame 36, mRNA (cDNA clone
MGC:33996 IMAGE:5260372), complete cds.
ACCESSION BC036540
VERSION BC036540.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2887)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2887)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC036540.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: f Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 44888824.
FEATURES Location/Qualifiers
source 1..2887
/db_xref="H-InvDB:HIT000051738"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33996 IMAGE:5260372"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2887
/gene="C13orf36"
/gene_synonym="RP11-16L6.1"
/db_xref="GeneID:400120"
/db_xref="HGNC:HGNC:33792"
CDS 447..770
/gene="C13orf36"
/gene_synonym="RP11-16L6.1"
/codon_start=1
/product="chromosome 13 open reading frame 36"
/protein_id="AAH36540.1"
/db_xref="GeneID:400120"
/db_xref="HGNC:HGNC:33792"
/translation="MSEPDTSSGFSGSVENGTFLELFPTSLSTSVDPSSGHLSNVYIY
VSIFLSLLAFLLLLLIIALQRLKNIISSSSSYPGYPSDAGSSFTNLEVCSISSQRSTF
SNLSS"
BASE COUNT 819 a 596 c 604 g 868 t
ORIGIN
1 gagactaggg ggcggcgagg agtgggaccc gctcgcggcc attggttgtg cggccaggag
61 gggcggaggg acgacgcgcg ggctgtgcgg ggccggcagc ccggatccac tcccgctgcg
121 cctgctgtcc gccgtgcgcc cagactgcgc gccgcgccgc tgcgcccaac attcccgagg
181 acggcttcgc gggcgcgtat cgtccagacc ggagcaccgc cccaccgcta gcgcaggaga
241 cctgccgggg aagtcgcgtg tcctgacctg cagtctcaat gcacatctga tacctgctgc
301 ctttgagaaa caagttttgt tgtgctgatt taacagcctg tgaattctgc aaacacgatc
361 gtgaaaaaat gccaatctgt cctgtgtaag ccctgtgtga agttttgact ttaatctacc
421 agatcactcc ttcaccctcc ataaagatgt ctgaacctga cacttcctca ggattttcgg
481 gaagtgtgga gaatggaact tttcttgagc tgtttcccac atccctgtcc acgtcagtgg
541 acccatcctc aggccacctg tcaaacgtct acatctatgt gtccatattc ctcagccttt
601 tagcgtttct gcttctgctt ttaatcattg ccctccagag gctcaaaaat atcatctcct
661 ccagttcctc ctacccaggg tatccaagcg acgctggaag ttctttcacc aatttggaag
721 tctgcagcat ttcctctcag aggtccactt tttcaaacct ttcatcctga ggaaaatgga
781 agagtccttg agtgtggcag cagttttgac atccccttac ggaagtgtcc cgtgaggcat
841 tgcctcatga aagaaatgat ccttttggtg tagacctgct tctccttctc ctttttctct
901 gatttctttt ctgttcatga tgcttttcat ttggggatgg agacaccgat gttggtggaa
961 atgtgtgcaa accccaaggt gcagaatttc acacaaatgg cttgatgaat ctagactggg
1021 cttcttcagg taagtcagtt cattctactt tgttggacgc cgtagactca tctgaggtgg
1081 cctctccgtg gatgctggac atggactcgc acttcatttc ttttacaaag ccgtgaaatc
1141 aactgagcct gcagaaactg gcaaaatcaa gtctgaccta tgtagaagtt attttccata
1201 tttaaaagat aaagtggaga caccaaactt aaaaaggaag agagtcaatt tagatttaat
1261 gtatgacatt tctaaaactg agggtaaata tatgctaaat attttcttta acttcacttt
1321 aacaagtaaa aatcacactt attgatgaat gtaagtcatt tgggaaagtt ttggaagagt
1381 ttacatttta atagcaagac aaacatgtat tatgatggag cttgtgatgt atttctgcct
1441 cctggagttt tattttgttt ttctgcttat gttttagtca taatgccaca aagttgtgga
1501 atttttgtga ttaattgctg ttactagtac taagagaagc accagaagag atgccaagaa
1561 gtttttatat gaataatttc tatcagtgag aattaagcat atggaaaata ttcatttagt
1621 tgtattttat acagtaataa ctcttagctg tcgtgtaagt tcctttattc ggtttcatag
1681 tctttataat tttagtgcag aattatatta agcctccaag atgtctgata tttgttcact
1741 cacattaggt tgtaaaactt agaaactaaa ttgcaaatat atgtgttatt atatactcca
1801 cgaatgttgc gtctctgata attagttgtt gtatgttaac ataatactct acattaggat
1861 ttcaggatgt gagtttgtat taaaaattgt aggcactcaa gttgtgtagc tgctgggagc
1921 tttagggatc ctaggagctg ccgtgctgca ggcagcagag tatgtctgaa ctcggcgggc
1981 gggtggcagg ggctgtctgt gaaattaggc acacatgtga gctcagacat ggaatgtgga
2041 ggaactcaag ctgcccctaa aaacaaaaca atcaaactgc agctccttaa gagtaagaat
2101 tttaatttaa ttttgaaaat aaatggccca cagggtaaac actgaactta ttcaacctac
2161 aggaggccac tgcatcaaca cgccacggtc ttcccatggc aactgaatca ttccttgttc
2221 aaaacattta atcatcttaa gcagtggggc ttcaacacac cgtttggtta gattgtgcag
2281 tcagcactct ccagtgatta gaatggggga aagaatccac tatttgtaca gggtttatct
2341 ttatcatact aaaatgctga gtgagtggag gtctgggaat gaaaatcaga agtcttcttc
2401 ttcttttaat tcataagcct cacttaaatc agaacacatt taactattta tatatcaaaa
2461 acgtccccaa acaccataag accagcacag agttgctgcc ctaaaatgta taattagtga
2521 aaaatttacc tctgcttcca tttaaagcat ggcagtgggt tgggtgtcat tatgtagtat
2581 aaaaactgga ctagataaac tgctatttta gagcattatt agcattctct gaatatatgt
2641 atatatacat atatatacgc acacacacac acacataaat atatatatat atatatatat
2701 aaactcacat actcccaatt aaaagtcgtg tgaaagctac acaggattac agaggcatct
2761 atattatcac ttttgctctt tgactaatcc tatgctgttt ttgttataga gagaaacaag
2821 gacatggatg aagtgatttt ttttttaaat aaaaggacaa atttgccaca caaaaaaaaa
2881 aaaaaaa
//