LOCUS BC036518 3749 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens galactosylceramidase, mRNA (cDNA clone MGC:33117
IMAGE:5267705), complete cds.
ACCESSION BC036518
VERSION BC036518.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3749)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3749)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC036518.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: l Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557612.
FEATURES Location/Qualifiers
source 1..3749
/db_xref="H-InvDB:HIT000051725"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33117 IMAGE:5267705"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3749
/gene="GALC"
/db_xref="GeneID:2581"
/db_xref="HGNC:HGNC:4115"
/db_xref="MIM:606890"
CDS 8..2017
/gene="GALC"
/codon_start=1
/product="GALC protein"
/protein_id="AAH36518.1"
/db_xref="GeneID:2581"
/db_xref="HGNC:HGNC:4115"
/db_xref="MIM:606890"
/translation="MTAAAGSAGRAAVPLLLCALLAPGGAYVLDDSDGLGREFDGIGA
VSGGGATSRLLVNYPEPYRSQILDYLFKPNFGASLHILKVEIGGDGQTTDGTEPSHMH
YALDENYFRGYEWWLMKEAKKRNPNITLIGLPWSFPGWLGKGFDWPYVNLQLTAYYVV
TWIVGAKRYHDLDIDYIGIWNERSYNANYIKILRKMLNYQGLQRVKIIASDNLWESIS
ASMLLDAELFKVVDVIGAHYPGTHSAKDAKLTGKKLWSSEDFSTLNSDMGAGCWGRIL
NQNYINGYMTSTIAWNLVASYYEQLPYGRCGLMTAQEPWSGHYVVESPVWVSAHTTQF
TQPGWYYLKTVGHLEKGGSYVALTDGLGNLTIIIETMSHKHSKCIRPFLPYFNVSQQF
ATFVLKGSFSEIPELQVWYTKLGKTSERFLFKQLDSLWLLDSDGSFTLSLHEDELFTL
TTLTTGRKGSYPLPPKSQPFPSTYKDDFNVDYPFFSEAPNFADQTGVFEYFTNIEDPG
EHHFTLRQVLNQRPITWAADASNTISIIGDYNWTNLTTKCDVYIETPDTGGVFIAGRV
NKGGILIRSARGIFFWIFANGSYRVTGDLAGWIIYALGRVEVTAKKWYTLTLTIKGHF
ASGMLNDKSLWTDIPVNFPKNGWAAIGTHSFEFAQFDNFLVEATR"
BASE COUNT 1053 a 728 c 794 g 1174 t
ORIGIN
1 aaaagctatg actgcggccg cgggttcggc gggccgcgcc gcggtgccct tgctgctgtg
61 tgcgctgctg gcgcccggcg gcgcgtacgt gctcgacgac tccgacgggc tgggccggga
121 gttcgacggc atcggcgcgg tcagcggcgg cggggcaacc tcccgacttc tagtaaatta
181 cccagagccc tatcgttctc agatattgga ttatctcttt aagccgaatt ttggtgcctc
241 tttgcatatt ttaaaagtgg aaataggtgg tgatgggcag acaacagatg gcactgagcc
301 ctcccacatg cattatgcac tagatgagaa ttatttccga ggatacgagt ggtggttgat
361 gaaagaagct aagaagagga atcccaatat tacactcatt gggttgccat ggtcattccc
421 tggatggctg ggaaaaggtt tcgactggcc ttatgtcaat cttcagctga ctgcctatta
481 tgtcgtgacc tggattgtgg gcgccaagcg ttaccatgat ttggacattg attatattgg
541 aatttggaat gagaggtcat ataatgccaa ttatattaag atattaagaa aaatgctgaa
601 ttatcaaggt ctccagcgag tgaaaatcat agcaagtgat aatctctggg agtccatctc
661 tgcatccatg ctccttgatg ccgaactctt caaggtggtt gatgttatag gggctcatta
721 tcctggaacc cattcagcaa aagatgcaaa gttgactggg aagaagcttt ggtcttctga
781 agactttagc actttaaata gtgacatggg tgcaggctgc tggggtcgca ttttaaatca
841 gaattatatc aatggctata tgacttccac aatcgcatgg aatttagtgg ctagttacta
901 tgaacagttg ccttatggga gatgcgggtt gatgacggcc caggagccat ggagtgggca
961 ctacgtggta gaatctcctg tctgggtatc agctcatacc actcagttta ctcaacctgg
1021 ctggtattac ctgaagacag ttggccattt agagaaagga ggaagctacg tagctctgac
1081 tgatggctta gggaacctca ccatcatcat tgaaaccatg agtcataaac attctaagtg
1141 catacggcca tttcttcctt atttcaatgt gtcacaacaa tttgccacct ttgttcttaa
1201 gggatctttt agtgaaatac cagagctaca ggtatggtat accaaacttg gaaaaacatc
1261 cgaaagattt ctttttaagc agctggattc tctatggctc cttgacagcg atggcagttt
1321 cacactgagc ctgcatgaag atgagctgtt cacactcacc actctcacca ctggtcgcaa
1381 aggcagctac ccgcttcctc caaaatccca gcccttccca agtacctata aggatgattt
1441 caatgttgat tacccatttt ttagtgaagc tccaaacttt gctgatcaaa ctggtgtatt
1501 tgaatatttt acaaatattg aagaccctgg cgagcatcac ttcacgctac gccaagttct
1561 caaccagaga cccattacgt gggctgccga tgcatccaac acaatcagta ttataggaga
1621 ctacaactgg accaatctga ctacaaagtg tgatgtttac atagagaccc ctgacacagg
1681 aggtgtgttc attgcaggaa gagtaaataa aggtggtatt ttgattagaa gtgccagagg
1741 aattttcttc tggatttttg caaatggatc ttacagggtt acaggtgatt tagctggatg
1801 gattatatat gctttaggac gtgttgaagt tacagcaaaa aaatggtata cactcacgtt
1861 aactattaag ggtcatttcg cctctggcat gctgaatgac aagtctctgt ggacagacat
1921 ccctgtgaat tttccaaaga atggctgggc tgcaattgga actcactcct ttgaatttgc
1981 acagtttgac aactttcttg tggaagccac acgctaatac ttaacagggc atcatagaat
2041 actctggatt ttcttccctt ctttttggtt ttggttcaga gccaattctt gtttcattgg
2101 aacagtatat gaggcttttg agactaaaaa taatgaagag taaaagggga gagaaattta
2161 tttttaattt accctgtgga agattttatt agaattaatt ccaaggggaa aactggtgaa
2221 tctttaacat tacctggtgt gttccctaac attcaaactg tgcattggcc atacccttag
2281 gagtggtttg agtagtacag acctcgaagc cttgctgcta acactgaggt agctctcttc
2341 atcttatttg caagcggtcc tgtagatggc agtaacttga tcatcactga gatgtattta
2401 tgcatgctga ccgtgtgtcc aagtgagcca gtgtcttcat cacaagatga tgctgccata
2461 atagaaagct gaagaacact agaagtagct ttttgaaaac cacttcaacc tgttatgctt
2521 tatgctctaa aaagtatttt ttttattttc ctttttaaga tgatactttt gaaatgcagg
2581 atatgatgag tgggatgatt ttaaaaatgc ctctttaata aactacctct aacactattt
2641 ctgtggtaat agatattagc agattaattg ggttatttgc attatttaat ttttttgatt
2701 ccaagttttg gtcttgtaac cactataact ctctgtgaac atttttccag gtggctggaa
2761 gaaggaagaa aacctgatat agccaatgct gttgtagtcg tttcctcagc ctcatctcac
2821 tgtgctgtgg tctgtcctca catgtgcact ggtaacagac tcacacagct gatgaatgct
2881 tttctctcct tatgtgtgga aggaggggag cacttagaca tttgctaact cccagaattg
2941 gatcatctcc taagatgtac ttacttttta aagtccaaat atgtttatat ttaaatatac
3001 gtgagcatgt tcatcatgtt gtatgattta tactaagcat taatgtggct ctatgtagca
3061 aatcagttat tcatgtaggt aaagtaaatc tagaattatt tataagaatt actcattgaa
3121 ctaattctac tatttaggaa tttgtaagag tctaacatag gcttagctac agtgaagttt
3181 tgcattgctt ttgaagacaa gaagataagt gctagaataa ataagattac agagaaaatt
3241 ttttgttaaa accaagtgat ttccagctga tgtatctaat attttttaaa acgaacatta
3301 tagaggtgta atttatttac aataaaatgt tcctacttta aatatacaat tcagtgagtt
3361 ttgataaatt gatataccca tgtaaccaac actccagtca agcttcagaa tatttccatc
3421 accccagaag gttctcttgt atacctgctc agtcagttcc tttcactccc gattgttggc
3481 agccattgat aggaattcta tcactatagg ttagttttct ttgttccaga acatcatgaa
3541 agcggcgtca tgtactgtgt attcttatga atggtttctt tccatcagca taatgatttg
3601 agatttgtcc atgttgtgtg attcagtggt ttgttccttc ttatttctga agagttttcc
3661 attgtatgaa tataccacaa tttgtttcct ccccaccagt ttctgatact acaattaaaa
3721 ctgtctacat ttacaaaaaa aaaaaaaaa
//