LOCUS BC036307 1633 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens calponin 1, basic, smooth muscle, mRNA (cDNA clone
MGC:35047 IMAGE:5165618), complete cds.
ACCESSION BC036307
VERSION BC036307.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1633)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1633)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: l Column: 12.
FEATURES Location/Qualifiers
source 1..1633
/db_xref="H-InvDB:HIT000051666"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35047 IMAGE:5165618"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1633
/gene="CNN1"
/gene_synonym="Sm-Calp"
/gene_synonym="SMCC"
/db_xref="GeneID:1264"
/db_xref="HGNC:HGNC:2155"
/db_xref="MIM:600806"
CDS 151..1044
/gene="CNN1"
/gene_synonym="Sm-Calp"
/gene_synonym="SMCC"
/codon_start=1
/product="calponin 1, basic, smooth muscle"
/protein_id="AAH36307.2"
/db_xref="GeneID:1264"
/db_xref="HGNC:HGNC:2155"
/db_xref="MIM:600806"
/translation="MSSAHFNRGPAYGLSAEVKNKLAQKYDHQREQELREWIEGVTGR
RIGNNFMDGLKDGIILCEFINKLQPGSVKKINESTQNWHQLENIGNFIKAITKYGVKP
HDIFEANDLFENTNHTQVQSTLLALASMAKTKGNKVNVGVKYAEKQERKFEPGKLREG
RNIIGLQMGTNKFASQQGMTAYGTRRHLYDPKLGTDQPLDQATISLQMGTNKGASQAG
MTAPGTKRQIFEPGLGMEHCDTLNVSLQMGSNKGASQRGMTVYGLPRQVYDPKYCLTP
EYPELGEPAHNHHAHNYYNSA"
BASE COUNT 442 a 488 c 447 g 256 t
ORIGIN
1 gccaatggaa cggccctgga agagacccgg gtcgcctccg gagcttcaaa aacatgtgag
61 gagggaagag tgtgcagacg gaacttcagc cgctgcctct gttctcagcg tcagtgccgc
121 cactgccccc gccagagccc accggccagc atgtcctctg ctcacttcaa ccgaggccct
181 gcctacgggc tgtcagccga ggttaagaac aagctggccc agaagtatga ccaccagcgg
241 gagcaggagc tgagagagtg gatcgagggg gtgacaggcc gtcgcatcgg caacaacttc
301 atggacggcc tcaaagatgg catcattctt tgcgaattca tcaataagct gcagccaggc
361 tccgtgaaga agatcaatga gtcaacccaa aattggcacc agctggagaa catcggcaac
421 ttcatcaagg ccatcaccaa gtatggggtg aagccccacg acatttttga ggccaacgac
481 ctgtttgaga acaccaacca tacacaggtg cagtccaccc tcctggcttt ggccagcatg
541 gcgaagacga aaggaaacaa ggtgaacgtg ggagtgaagt acgcagagaa gcaggagcgg
601 aaattcgagc cggggaagct aagagaaggg cggaacatca ttgggctgca gatgggcacc
661 aacaagtttg ccagccagca gggcatgacg gcctatggca cccggcgcca cctctacgac
721 cccaagctgg gcacagacca gcctctggac caggcgacca tcagcctgca gatgggcacc
781 aacaaaggag ccagccaggc tggcatgact gcgccaggga ccaagcggca gatcttcgag
841 ccggggctgg gcatggagca ctgcgacacg ctcaatgtca gcctgcagat gggcagcaac
901 aagggcgcct cgcagcgggg catgacggtg tatgggctgc cacgccaggt ctacgacccc
961 aagtactgtc tgactcccga gtacccagag ctgggtgagc ccgcccacaa ccaccacgca
1021 cacaactact acaattccgc ctagggccac aaggccttcc ctgttttccc cccaagggag
1081 gctgctgctg ctcttggctg gacccagcca ggcccagccg accccctctc cctgcatggc
1141 atcctccagc ccctgtagaa ctcaacctct acagggttag agtttggaga gagcagactg
1201 gcggggggcc cattgggggg aaggggaccc tccgctctgt agtgctacag ggtccaacat
1261 agagccgggt gtccccaaca gcgcccaaag gacgcactga gcaacgctat tccagctgtc
1321 cccccactcc ctcacaagtg ggtaccccca ggaccagaag ctcccccagc aaagccccca
1381 gagcccaggc tcggcctgcc cccaccccat tcccgcagtg ggagcaaact gcatgcccag
1441 agacccagcg gacacacgcg gtttggtttg cagcgactgg catactatgt ggatgtgaca
1501 gtggcgtttg taatgagagc actttctttt ttttctattt cactggagca caataaatgg
1561 ctgtaaaatc tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaaaaa aaa
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