LOCUS BC036305 2003 bp mRNA linear HUM 07-OCT-2003
DEFINITION Homo sapiens glucocorticoid modulatory element binding protein 2,
mRNA (cDNA clone MGC:34137 IMAGE:5166938), complete cds.
ACCESSION BC036305
VERSION BC036305.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2003)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2003)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: n Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13435378.
FEATURES Location/Qualifiers
source 1..2003
/db_xref="H-InvDB:HIT000051665"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34137 IMAGE:5166938"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2003
/gene="GMEB2"
/gene_synonym="KIAA1269"
/gene_synonym="P79PIF"
/gene_synonym="PIF79"
/db_xref="GeneID:26205"
/db_xref="MIM:607451"
CDS 131..1723
/gene="GMEB2"
/gene_synonym="KIAA1269"
/gene_synonym="P79PIF"
/gene_synonym="PIF79"
/codon_start=1
/product="GMEB2 protein"
/protein_id="AAH36305.1"
/db_xref="GeneID:26205"
/db_xref="MIM:607451"
/translation="MATPDVSVHMEEVVVVTTPDTAVDGSGVEGVKTVLVTTNLAPHG
GDLTEDNMETENAAAAAAAAFTASSQLKEAVLVKMAEEGENLEAEIVYPITCGDSRAN
LIWRKFVCPGINVKCVQYDEHVISPKEFVHLAGKSTLKDWKRAIRMNGIMLRKIMDSG
ELDFYQHDKVCSNTCRSTKIDLSGARVSLSSPTSAEYIPLTPAAADVNGSPATITIET
CEDPGDWTAAIGDDTFTFWRGLKDAGLLDEVIQEFHQELVETMRGLQQRVQDPPLQLR
DAVLLNNIVQNFGMLDLVKKVLASHKCQMDRSREQYARDLAALEQQCDEHRRRAKELK
HKSQHLSNVLMTLTPVSLPPPVKRPRLARATSGPAAMASQVLTQSAQLALGPGVPVPQ
LTSVPLGKVVSTLPSTVLGKGSLQAPPASSPASPLLGGYTVLASSGSTYPSTVEIHPD
ASSLTVLSTAAVQDGSTVFKVVSPLQLLTLPGLGPTLQNVAQASPGSSTIVTVPAGAA
PGPEEHTATIEVAAMAEDHERK"
misc_feature 371..619
/gene="GMEB2"
/gene_synonym="KIAA1269"
/gene_synonym="P79PIF"
/gene_synonym="PIF79"
/note="SAND; Region: SAND domain. The DNA binding activity
of two proteins has been mapped to the SAND domain. The
conserved KDWK motif is necessary for DNA binding, and it
appears to be important for dimerisation"
/db_xref="CDD:pfam01342"
BASE COUNT 415 a 639 c 625 g 324 t
ORIGIN
1 ccgcccgccg ccgccgcagc tcccgacgcc gccgcccccg ccgggtgcct aagcaggccc
61 ggcgcggccc caggacttgg gaccctggag gactgacgct gctggcctgg gcgtcccctt
121 ccgctgagcc atggcgactc ccgacgtgag tgtgcacatg gaggaggtgg tggttgtgac
181 aactccggac actgcagtgg acggcagtgg tgtggagggg gtgaagaccg tgttggtgac
241 gaccaacttg gcccctcacg ggggcgacct gacggaagat aacatggaga cagaaaatgc
301 agcggcggca gctgccgcgg ccttcacagc ctcctcccag ctcaaggaag ccgtgttagt
361 gaagatggct gaagaggggg agaacctgga agctgagatt gtgtacccca tcacctgtgg
421 agacagcaga gccaacctca tctggaggaa gtttgtgtgt cccggcatca atgtgaaatg
481 tgttcagtac gacgagcatg taatcagccc aaaggaattt gtgcacctgg ccgggaagtc
541 caccctgaag gactggaaga gagccatccg catgaacggc atcatgctca ggaagatcat
601 ggactccggg gaactggact tctaccagca cgacaaggtc tgctccaaca cctgccgcag
661 cacaaagatt gacctctcag gagcccgtgt gtccctgagc agccccacgt cggccgagta
721 cattcccctc acgcccgccg cagccgacgt gaatgggtct cctgcgacca tcaccataga
781 gacctgtgaa gaccctggcg actggaccgc ggccattgga gatgacacat ttaccttctg
841 gcgggggctg aaggacgccg gcctgctgga cgaggtcatc caggagttcc accaggagct
901 ggtggagacc atgagaggcc tgcagcagcg ggtccaggac cctcccctgc agcttcgaga
961 tgctgtactt ctcaacaaca tcgtgcagaa cttcggcatg ctggacctgg tgaagaaggt
1021 gctggccagc cacaagtgcc agatggaccg ctcgcgggag cagtacgccc gggacctggc
1081 agccctggag cagcagtgtg atgagcatcg tcgccgagcc aaggagctga agcacaagtc
1141 ccagcacctc agcaacgtgc tcatgacgct gacgccggtc tccctgccac cgcctgtgaa
1201 gcggccccgg cttgcacgtg ccacatcagg accggccgcc atggcctcgc aggtgctcac
1261 ccagtctgcc cagctggcgc ttggcccggg cgtgcccgtc ccccagctga ccagcgtgcc
1321 ccttggtaaa gtggtgtcca ccctgccgtc caccgtcctg ggcaagggtt cccttcaggc
1381 gccccccgcc agctccccgg cctccccgct gctcggggga tacacagtct tggcctcttc
1441 cggctccacc taccccagca cagtggagat ccacccggac gcgtccagcc tcacggtcct
1501 gagcacggcc gccgtgcagg acggtagcac ggtgttcaag gtggtcagcc cgctgcagct
1561 gctcacgttg cctggcctgg gccccaccct gcagaacgtg gcccaggcct cgcctggctc
1621 cagcacaatt gtgacagtgc ccgcaggggc tgcccccggg cctgaggagc acacggccac
1681 cattgaggtg gctgccatgg cagaggacca cgagcggaag tagccgacag gagggcgagg
1741 cccctgggac ggacagggct ggctgtctct cagccgcggc agcagggagc gggcagaggc
1801 cgcagggctg gctcgggcag gtgggtcacg tggtctgcag aaccaaagag aggaatcgcc
1861 aaaacaaatc acgagaagag agaaggggac agaacagcga gagcaacctg gaaaaccggt
1921 cttcaggtcc cacgtttcct cccccttttt tcttgggaaa tatatttttc catctgttgc
1981 ttattaaaaa aaaaaaaaaa aaa
//