LOCUS BC036240 1990 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens septin 6, mRNA (cDNA clone MGC:39811 IMAGE:5298284),
complete cds.
ACCESSION BC036240
VERSION BC036240.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1990)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1990)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: o Column: 2.
FEATURES Location/Qualifiers
source 1..1990
/db_xref="H-InvDB:HIT000051655"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39811 IMAGE:5298284"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1990
/gene="SEPT6"
/gene_synonym="KIAA0128"
/gene_synonym="MGC16619"
/gene_synonym="MGC20339"
/gene_synonym="RP5-876A24.2"
/gene_synonym="SEP2"
/db_xref="GeneID:23157"
/db_xref="HGNC:HGNC:15848"
CDS 93..1397
/gene="SEPT6"
/gene_synonym="KIAA0128"
/gene_synonym="MGC16619"
/gene_synonym="MGC20339"
/gene_synonym="RP5-876A24.2"
/gene_synonym="SEP2"
/codon_start=1
/product="septin 6"
/protein_id="AAH36240.1"
/db_xref="GeneID:23157"
/db_xref="HGNC:HGNC:15848"
/translation="MAATDIARQVGEGCRTVPLAGHVGFDSLPDQLVNKSVSQGFCFN
ILCVGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVST
VGFGDQINKEDSYKPIVEFIDAQFEAYLQEELKIRRVLHTYHDSRIHVCLYFIAPTGH
SLKSLDLVTMKKLDSKVNIIPIIAKADAISKSELTKFKIKITSELVSNGVQIYQFPTD
DESVAEINGTMNAHLPFAVIGSTEELKIGNKMMRARQYPWGTVQVENEAHCDFVKLRE
MLIRVNMEDLREQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFLGE
LQKKEEEMRQMFVQRVKEKEAELKEAEKELHEKFDRLKKLHQDEKKKLEDKKKSLDDE
VNAFKQRKTAAELLQSQGSQAGGSQTLKRDKEKKNNPWLCTE"
BASE COUNT 570 a 473 c 509 g 438 t
ORIGIN
1 acttttctct ttgtcggagg agctcctctg tttcctgtgc agtagctccc gttgcggcgg
61 cacccgtggc agccctggcg gacgcaggag cgatggcagc gaccgatata gctcgccagg
121 tgggtgaagg ttgccgaact gtccccctgg ctggacatgt ggggtttgac agcttgcctg
181 accagctggt gaataagtcc gtcagccagg gcttctgctt caacatcctg tgcgtgggag
241 agacaggttt gggcaagtcc accctcatgg acaccctgtt caacaccaaa ttcgaagggg
301 agccagccac ccacacacag ccgggtgtcc agctccagtc taatacctat gacctccaag
361 agagcaacgt gaggctaaag ctcacgatcg ttagcacagt tggctttggg gaccagatca
421 acaaagagga cagctacaag cctatcgtgg aattcatcga tgcacaattc gaggcctacc
481 tgcaggaaga gctaaagatc cgaagagtgc tacacaccta ccatgactcc cgaatccatg
541 tctgcttgta tttcattgcc cccacgggtc attccctgaa gtctctggac ctagtgacta
601 tgaagaagct ggacagtaag gtgaacatca tccccatcat tgccaaagca gatgccattt
661 cgaagagtga gctaacaaag ttcaaaatca aaatcaccag cgagcttgtc agcaacggag
721 tccagatcta tcagtttcct acagatgatg agtcggtggc agagatcaat ggaaccatga
781 acgcccacct gccgtttgct gtcattggca gcacagaaga actgaagata ggcaacaaga
841 tgatgagggc gcggcagtat ccttggggca ctgtgcaggt tgaaaacgag gcccactgcg
901 actttgtgaa gctgcgggag atgctgattc gggtcaacat ggaggatctg cgggagcaga
961 cccacacccg gcactatgag ctgtatcgcc gctgtaagct ggaggagatg ggcttcaagg
1021 acaccgaccc tgacagcaaa cccttcagtt tacaggagac atatgaggcc aaaaggaacg
1081 agttcctagg ggaactccag aaaaaagaag aggagatgag acagatgttc gtccagcgag
1141 tcaaagagaa agaagcggag ctcaaagagg cagagaaaga gctgcacgag aagtttgacc
1201 gtctgaagaa actgcaccag gacgagaaga agaaactgga ggataagaag aaatccctgg
1261 atgatgaagt gaatgctttc aagcaaagaa agacggcggc tgagctgctc cagtcccagg
1321 gctcccaggc tggaggctca cagactctga agagagacaa agagaagaaa aataatccat
1381 ggctgtgtac tgaatagtat tccccgctac agctggactg gactccattt agccttttaa
1441 gccgaggttc ctattttaac tgacagcttt cctttggggt gccaggcagc gaggcccccc
1501 acccctatcc tgccatgtac ttcaagctca cttcttcttt ttgagttccg caacttgctc
1561 ctgcctccca gccccactgg cactgaccat gaccacctac ttctattttt tttttagagt
1621 ttcttttttt gatcacttac tttcaaagca cacagtcaaa caaggttatg ccaaatttcc
1681 aggccttttt gaagtattga gaaggggaag gggatttctc acttcaatta tagatcataa
1741 taggaagcaa aaagaaaaaa atgaaaagca aacatatgca cgcacttttc ttgttgacaa
1801 agcaagaatg taggtttgct gtgtaggttt ggtgctctat tgattggtga gtgaccagag
1861 caagtatgaa ggtgatgctg ccaaagcaca agccagtttc ttgggaaaat tcaagttaca
1921 gtggagtatt tttttgaaga ccatatgctt ggaggtagaa acaaaccaac gaccaaaaaa
1981 aaaaaaaaaa
//