LOCUS BC036228 1750 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens potassium channel tetramerisation domain containing
13, mRNA (cDNA clone MGC:39734 IMAGE:5276078), complete cds.
ACCESSION BC036228
VERSION BC036228.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1750)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1750)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: k Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31341469.
FEATURES Location/Qualifiers
source 1..1750
/db_xref="H-InvDB:HIT000051650"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39734 IMAGE:5276078"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1750
/gene="KCTD13"
/gene_synonym="FKSG86"
/gene_synonym="PDIP1"
/gene_synonym="POLDIP1"
/db_xref="GeneID:253980"
/db_xref="HGNC:HGNC:22234"
/db_xref="MIM:608947"
CDS 192..1181
/gene="KCTD13"
/gene_synonym="FKSG86"
/gene_synonym="PDIP1"
/gene_synonym="POLDIP1"
/codon_start=1
/product="potassium channel tetramerisation domain
containing 13"
/protein_id="AAH36228.1"
/db_xref="GeneID:253980"
/db_xref="HGNC:HGNC:22234"
/db_xref="MIM:608947"
/translation="MSAEASGPAAAAAPSLEAPKPSGLEPGPAAYGLKPLTPNSKYVK
LNVGGSLHYTTLRTLTGQDTMLKAMFSGRVEVLTDAGGWVLIDRSGRHFGTILNYLRD
GSVPLPESTRELGELLGEARYYLVQGLIEDCQLALQQKRETLSPLCLIPMVTSPREEQ
QLLASTSKPVVKLLHNRSNNKYSYTSTSDDNLLKNIELFDKLALRFHGRLLFLKDVLG
DEICCWSFYGQGRKIAEVCCTSIVYATEKKQTKVEFPEARIFEETLNILIYETPRGPD
PALLEATGGAAGAGGAGRGEDEENREHRVRRIHVRRHITHDERPHGQQIVFKD"
BASE COUNT 354 a 565 c 479 g 352 t
ORIGIN
1 ctgcccggcg ccggcttccg ggtggtgcga gcgagatggg gcggagggcc ggtcttgcag
61 agtagctgcg gtgagtgggc gtgtgcgccg agcggtctgg cccaagggct gggggccggc
121 cgagggtctt cgggagcagg ccgcagggcg cggagagatc ctgggatcgc cgtccgccgc
181 tgctacccgg catgtcggcg gaggcctcgg gcccggctgc cgccgcggcc ccgtccctgg
241 aagcccccaa gccctcgggt ctcgagcctg gccccgccgc ctacggtctc aagccgctga
301 ccccgaacag caaatacgtg aagctgaacg tgggcggctc gttgcactac accacgctgc
361 gcaccctcac gggacaggac accatgctca aagccatgtt cagcggccgc gtggaggtgc
421 tgaccgatgc cggaggttgg gtgctgattg accggagcgg ccgtcacttt ggtacaatcc
481 tcaattacct gcgggatggg tctgtgccac tgccggagag tacgagagaa ctgggggagc
541 tgctgggcga agcacgctac tacctggtgc agggcctgat tgaggactgc cagctggcgc
601 tgcagcaaaa aagggagacg ctgtccccgc tgtgcctcat ccccatggtg acatctcccc
661 gggaggagca gcagctcctg gccagcacct ccaagcccgt ggtgaagctc ctgcacaacc
721 gcagtaacaa caagtactcc tacaccagca cttcagatga caacctactt aagaacatcg
781 agctgttcga caagctggcc ctgcgcttcc acgggcggct actcttcctc aaggatgtcc
841 tgggggacga gatctgttgc tggtctttct acgggcaggg ccgcaaaatc gccgaggtgt
901 gctgcacctc cattgtctat gctacggaga agaagcagac caaggtggaa tttccagagg
961 cccggatctt cgaggagacc ctgaacatcc tcatctacga gactccccgg ggcccagacc
1021 cagccctcct ggaggccaca gggggagcag ctggagctgg tggggctggc cgcggggagg
1081 atgaagagaa ccgagagcac cgtgtccgca ggatccatgt ccggcgccat atcacccacg
1141 acgagcgtcc tcatggccaa caaattgtct tcaaggactg acctctgacc ctccccctgc
1201 cttcctcttg ccttgggacc cagtccctct ctctttccct ccccttccca gacttttgcc
1261 ccggctctgc tggccaagtc gtgggtcctc ctctgtccct tcattgcatg gcacagctca
1321 ctttggccct tctccaccca tcccaacccc attgctaaca acatggtaca ttccggcccc
1381 accactcaga gccttccgaa gccaacactt gtccccaccc tggccctgcg tccttccctc
1441 tccagctggt taagagggat ttagaattcc ctttctcttt ttttagtgca tcgtccatgc
1501 caaagtgtgc ggcccttcct gacatcacca cagtctgagc agcctcccgc gtcctgcagg
1561 gtagtccgcc ccctcctccc caccatcctc cctacctcct taactttgta ctagactggc
1621 ctgggcctgc ccagctcagc gttatcagtc tgtttcatat tatttattat tttaattttc
1681 tattaaatta ttgaaataaa gttaagttga gaaaaaaaaa aaaaaaaaaa aaagaaaaaa
1741 aaaaaaaaaa
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