LOCUS BC036216 3278 bp mRNA linear HUM 12-JAN-2007
DEFINITION Homo sapiens cullin 4B, mRNA (cDNA clone MGC:39677 IMAGE:5269392),
complete cds.
ACCESSION BC036216
VERSION BC036216.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3278)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3278)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: h Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28372492.
FEATURES Location/Qualifiers
source 1..3278
/db_xref="H-InvDB:HIT000051648"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39677 IMAGE:5269392"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3278
/gene="CUL4B"
/db_xref="GeneID:8450"
/db_xref="HGNC:HGNC:2555"
/db_xref="MIM:300304"
CDS 403..3144
/gene="CUL4B"
/codon_start=1
/product="cullin 4B"
/protein_id="AAH36216.1"
/db_xref="GeneID:8450"
/db_xref="HGNC:HGNC:2555"
/db_xref="MIM:300304"
/translation="MMSQSSGSGDGNDDEATTSKDGGFSSPSPSAAAAAQEVRSATDG
NTSTTPPTSAKKRKLNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPRDSASPSTSSFC
LGVSVAASSHVPIQKKLRFEDTLEFVGFDAKMAEESSSSSSSSSPTAATSQQQQLKNK
SILISSVASVHHANGLAKSSTTVSSFANSKPGSAKKLVIKNFKDKPKLPENYTDETWQ
KLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFR
EDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRA
HIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEE
TNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYLDQTTQKSLIATVEKQLLG
EHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVIN
PEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMKEAFETFINKRPNKPAELIAKY
VDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVD
AEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNIL
TMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTIGHCVLKAEFKEGK
KELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLAKNPK
GKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVR
IMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA"
BASE COUNT 1078 a 633 c 687 g 880 t
ORIGIN
1 agttcagttt agaaactgcc agtcttggta tagaacaacc taggcttatc tgtttaagtc
61 ccataggtag tattattaga gaataaccca ggctttggga actgtataac tctgagatcg
121 tttgaaattt tcgttttgtt tttcttttgg ctccaaccag gcctctgttg ttagactaat
181 ggggtttccc ctgcagagat tggtcagccc tgcagtctat catcccggaa ggtgttaaat
241 acacatgaaa gccagcctcg gcgggcagaa cctagcccgc cgaaagggcg ggcattgcta
301 aagtgttttc aaaaggtctt cccaatcctc tgctttagac agctcggacc ttagatagaa
361 gaacacaacg gatcctccag tgactgacga cccaaaggac ggatgatgtc acagtcatct
421 ggatcaggag atgggaatga tgatgaggct actacctcta aagacggtgg tttttcttcc
481 cccagtccct cagctgctgc tgctgctcag gaggtcagat ctgccactga tggtaatacc
541 agcaccactc cgcccacctc tgccaagaag agaaagttaa acagcagcag cagtagcagc
601 agtaacagta gtaacgagag agaagacttt gattccacct cttcctcctc ttccactcct
661 cctttacaac ccagggattc ggcatcccct tcaacctcgt ccttctgcct gggggtttca
721 gtggctgctt ccagccacgt accgatacag aagaagctgc gttttgaaga caccctggag
781 tttgtagggt ttgatgcgaa gatggctgag gaatcctcct cctcctcctc ctcatcttca
841 ccaactgctg caacatctca gcagcagcaa cttaaaaata agagtatatt aatctcttct
901 gtggcttcgg tgcatcatgc aaacggccta gccaaatctt ctaccaccgt ctctagcttt
961 gctaacagca aacctggctc tgctaagaag ttagtgatca agaactttaa agataagcct
1021 aaattaccag aaaactacac agatgaaacc tggcaaaaac tgaaagaagc agtggaagct
1081 attcagaata gtacttcaat taagtacaat ttagaagaac tctaccaggc tgtagaaaat
1141 ctctgttctt acaagatttc tgcaaacttg tacaaacagc tgagacagat ctgcgaagat
1201 cacatcaaag cacagattca tcaattcaga gaggattcat tggatagcgt tcttttttta
1261 aagaagattg atagatgctg gcaaaaccat tgcagacaaa tgatcatgat caggagcatt
1321 tttttgtttc tggatagaac ttacgttctt cagaattcaa tgctaccctc catttgggac
1381 atgggactgg agttatttag ggctcatatt ataagtgatc agaaagtgca gaataagaca
1441 attgatggca ttcttctctt gattgagagg gaaaggaatg gtgaagcaat tgatagaagt
1501 ttacttcgaa gccttttaag catgctgtct gatttgcaaa tttatcaaga ttcttttgaa
1561 caacgatttt tggaagaaac taaccggctc tatgcagctg aaggccaaaa attaatgcaa
1621 gaaagagagg ttcctgaata tctacatcat gttaacaaac gtctagaaga agaagcagac
1681 agacttatta cttacttaga tcagaccacc cagaagtcat taattgctac tgtagaaaaa
1741 caacttctag gtgaacactt aacagcaatt cttcagaaag gtttaaataa cctccttgat
1801 gaaaaccgaa ttcaagattt gtctcttctg tatcagctct tcagtagagt tcgaggtgga
1861 gttcaggttc ttttgcagca gtggatcgaa tatatcaagg catttggcag cactattgta
1921 attaatcctg aaaaagataa aaccatggtt caagaattgc tggattttaa agataaggtt
1981 gaccatataa ttgatatctg ctttctgaag aatgagaaat ttatcaatgc catgaaagaa
2041 gcatttgaaa cgttcattaa caaaagacca aataaaccag ctgaacttat agctaagtat
2101 gtagattcaa aacttcgtgc aggcaacaaa gaagctacag atgaagaact tgagaaaatg
2161 ttggataaaa ttatgatcat atttagattt atctatggca aggatgtttt tgaggccttc
2221 tataagaaag atttagccaa gcgcctgtta gtcggaaaga gtgcatctgt agatgctgaa
2281 aaatcaatgc tgtccaaact taaacatgaa tgcggagctg ctttcaccag caaacttgaa
2341 ggaatgttta aagacatgga actttctaaa gacatcatga ttcagttcaa acagtatatg
2401 cagaatcaga atgttccggg aaatattgag ttaactgtga atatcctgac aatgggctat
2461 tggccgacat atgtgcctat ggaagttcat ttaccaccag agatggtaaa acttcaggag
2521 attttcaaga cattttacct aggcaaacat agtggcagga aacttcagtg gcagtcaacc
2581 ataggacact gtgtgttaaa agcagaattt aaagagggta aaaaggaact ccaggtctct
2641 ctttttcaaa cactggtgct gctaatgttt aatgagggag aggagttcag tttagaagag
2701 atcaagcagg caactggaat agaggatgga gagttaagga gaacactgca gtcattagcc
2761 tgtggcaaag ctagagttct ggcgaaaaat ccaaagggca aagacattga agatggtgac
2821 aagttcattt gtaatgatga tttcaaacat aaacttttca ggataaagat caatcaaatc
2881 cagatgaaag aaacggttga agaacaagca agcactacag aaagagtatt tcaagacaga
2941 cagtatcaaa ttgatgctgc aattgttcga attatgaaga tgagaaagac acttagccac
3001 aatctccttg tttcagaagt gtacaaccag ttgaaatttc cagtaaagcc tgctgatctt
3061 aagaagagaa tagaatcttt aattgaccgg gactacatgg aaagagataa agaaaatcca
3121 aaccagtaca actatattgc atagaatgtt ggccttgcag catttggtgt catatgcagt
3181 agccagtgga taaactaacc tgttgattca atattatttg actccttttt tactaccgat
3241 gaccaaatga agcagtgtaa ttaaaaaaaa aaaaaaaa
//