LOCUS BC036202 2628 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 36, mRNA (cDNA clone
MGC:39573 IMAGE:4836976), complete cds.
ACCESSION BC036202
VERSION BC036202.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2628)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2628)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 63 Row: b Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31342337.
FEATURES Location/Qualifiers
source 1..2628
/db_xref="H-InvDB:HIT000051644"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39573 IMAGE:4836976"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2628
/gene="CCDC36"
/gene_synonym="FLJ25320"
/db_xref="GeneID:339834"
/db_xref="HGNC:HGNC:27945"
CDS 418..2172
/gene="CCDC36"
/gene_synonym="FLJ25320"
/codon_start=1
/product="coiled-coil domain containing 36"
/protein_id="AAH36202.1"
/db_xref="GeneID:339834"
/db_xref="HGNC:HGNC:27945"
/translation="MLSIPSGSGNKKSSNWNNNQNDYSSLSDSQFLFGSQFCPENSET
LSAPLDFGAHLRHSKQSQQNYLEGEPSIFTKYQTKPQLFGGDIKDGGLFPPPLSVGKS
KGLLEQFEEKKKRAKDKCDSETLYNFVSNVRESILRLQTSVEKSEDHLSSRSQSILDS
LETVAKTLQETIQAQNDLVFEAVQDKGNMEQAILEMKKRFEARQGEFIEMKSNLKHLE
VLVAQQSQEFQQLCEQLGQLNVPSVLAELKRLISVPPVKDSASQTSPPLAQSLNLTRQ
EKYTSEKPVLWQAQALPAAWNPGMGSLQPGEFDVWGEGAKNDDLQEEAALPAFGSHER
NRHVKDKVVQTNCKNWAVTKTGAKNHGSSVPGHKIPSDRDLVSQGASQLTSLEINFST
SIKNACQKYQAQSMFLCDPREHLVIKQKDGTVEMRGKDKKQQPRKAHRAHRGRLIASK
QKQIPIQTCKFNSKYQSPQPAISVPQSPFLGQQEPRAQPLHLQCPRSPRKPVCPILGG
TVMPNKTVRAVQGRLLQLSRCSSQDNWLLSSSSQGDHQMSWFSDLNLGCSETPLCKEA
GKNLLYDLGFDSSDDDGF"
BASE COUNT 740 a 647 c 650 g 591 t
ORIGIN
1 gcttttcctt catctccaaa gtcctctaaa ctgacagggt ctcattctgt cgcccaggct
61 ggagtgtagt gacgcgatct cggctcactg caacctctac ctcccaggtt caaacgatcc
121 tcccgcctca gcctccgagt agctgggacc acaggggccc ggttcgatgt ccccatctgc
181 ccacggcgcc tctcgtgcca gctgctccgc ctgtcctgcc cttgctcaga ccacccaagt
241 atcatctgtg ctctggcccc tggccaccag ttccacccca catgctgtcc tcacaggtgg
301 cgccttgcca ttcctgggga ccagggcctc cttgttctgg tcatacacag tggagtgtag
361 gtcgagcgac aagtataact ataagaaatg aattttaatg tctggaatat caaagagatg
421 ctcagtattc cttcaggctc tgggaacaag aagtcatcca actggaataa taatcaaaat
481 gattattcca gtctcagtga ttcccagttc ctctttggat ctcagttctg tccagaaaat
541 tcagaaaccc tatcagcacc cttggacttt ggtgcccact tgagacattc aaaacagtca
601 caacagaact atctggaggg tgaacctagc attttcacaa agtaccagac aaagccccag
661 ctgttcggag gagatataaa agatggaggt ttatttcctc ctcctttgtc agttggaaaa
721 tcaaaaggcc tcttggaaca gtttgaggag aaaaagaaaa gggcaaaaga caaatgtgac
781 agtgagactc tatacaactt tgtttctaat gttagagaaa gcattctcag gttgcagacg
841 tctgtggaaa agtctgagga ccatctcagt tcaagaagcc aatctatttt ggattctttg
901 gagactgtgg ccaagacatt acaagagact atacaggccc agaatgacct ggtgtttgag
961 gcagtccagg acaaaggcaa catggagcag gccatccttg agatgaagaa aagatttgaa
1021 gctagacaag gagagtttat agaaatgaag tccaacctga agcaccttga agttttagtt
1081 gctcagcaga gtcaggaatt ccagcagctg tgtgagcagc taggccagct gaatgtgccc
1141 agtgtcctag cagagctgaa gagattgatc tcagtgcctc cagtgaaaga cagtgcttct
1201 cagacgtcgc cacctttggc ccagagcctc aatctcacca ggcaggaaaa atacacctct
1261 gagaaaccag ttttatggca ggcccaggcc ctccctgctg catggaatcc tggtatgggc
1321 tccctacagc ctggagaatt tgatgtctgg ggtgaaggag caaagaatga tgatctccaa
1381 gaagaggctg cactgccagc atttgggtcc catgaaagaa ataggcatgt aaaggacaag
1441 gtggtgcaga ctaactgcaa gaactgggct gttactaaaa caggtgccaa gaaccatggt
1501 tccagcgtcc caggccataa gattcccagt gacagggacc tggtttccca aggagcctca
1561 cagctcacat cattggagat aaacttttca accagcatta agaatgcctg ccaaaaatat
1621 caagcccaaa gtatgttttt gtgtgaccca cgtgaacatt tggtgattaa acagaaagat
1681 gggactgtag aaatgcgggg gaaagacaag aagcagcagc ccaggaaggc ccacagggcc
1741 cacagaggca ggctcatagc cagcaagcaa aaacaaatcc caatccagac ctgtaaattc
1801 aattccaaat atcagagtcc tcagcctgca atttctgtcc ctcaaagccc cttcctgggg
1861 cagcaggaac cccgtgctca gcctctgcat ctgcagtgtc ccaggagccc cagaaaacca
1921 gtctgcccta ttctgggagg aacagtcatg cccaataaga cagtaagggc agtgcaggga
1981 agactcttgc agctcagcag gtgctcttcc caagacaact ggctactttc cagcagttcc
2041 cagggggacc accagatgag ctggttcagt gacctcaatc tcggatgttc agagacccct
2101 ctatgcaagg aggcaggaaa gaatttgctc tatgacctgg gttttgatag cagtgatgat
2161 gatggcttct gaccagtcca cagttgattt attggtctca gctagaaaga gaaattgcag
2221 gacatttggg ctggccaaca gcagaaagtc cctgaagcct gccaagtacc cagggtcaga
2281 ggccctgctg aggtggggca atgagcacga gggcagggaa ggtccagcat tctgggtacc
2341 aggtgctgcc cctgacaagg attaagtgca tccttattta ttggaatgaa atgtgaaaat
2401 ggtgctgatg aaaactgagg cagcagcctg gttgtggggc atctggagca gggtgcctgt
2461 actttggcga aaggcaggca ggcctcctta tggaatactg tgtagcagaa gggctctcat
2521 aaaactgttg cggtggcagc atgactccaa acaacatttt tgggtcttta aaatattccc
2581 tacacatgac caatacattt tcaggcctca ggaaaaaaaa aaaaaaaa
//