LOCUS BC036075 2837 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens GIPC PDZ domain containing family, member 2, mRNA
(cDNA clone MGC:33726 IMAGE:5296057), complete cds.
ACCESSION BC036075
VERSION BC036075.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2837)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2837)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: k Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41393578.
FEATURES Location/Qualifiers
source 1..2837
/db_xref="H-InvDB:HIT000051612"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33726 IMAGE:5296057"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2837
/gene="GIPC2"
/gene_synonym="FLJ20075"
/gene_synonym="SEMCAP-2"
/gene_synonym="SEMCAP2"
/db_xref="GeneID:54810"
/db_xref="HGNC:HGNC:18177"
CDS 191..1138
/gene="GIPC2"
/gene_synonym="FLJ20075"
/gene_synonym="SEMCAP-2"
/gene_synonym="SEMCAP2"
/codon_start=1
/product="GIPC PDZ domain containing family, member 2"
/protein_id="AAH36075.1"
/db_xref="GeneID:54810"
/db_xref="HGNC:HGNC:18177"
/translation="MPLKLRGKKKAKSKETAGLVEGEPTGAGGGSLSASRAPARRLVF
HAQLAHGSATGRVEGFSSIQELYAQIAGAFEISPSEILYCTLNTPKIDMERLLGGQLG
LEDFIFAHVKGIEKEVNVYKSEDSLGLTITDNGVGYAFIKRIKDGGVIDSVKTICVGD
HIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPKKAFEIEPRSKAGKSSGEKI
GCGRATLRLRSKGPATVEEMPSETKAKAIEKIDDVLELYMGIRDIDLATTMFEAGKDK
VNPDEFAVALDETLGDFAFPDEFVFDVWGVIGDAKRRGL"
BASE COUNT 827 a 470 c 652 g 888 t
ORIGIN
1 gggtgggcgg gcggctgctc cggtccaggg gtggaggtcg gggccctgac ccgacgcagc
61 caggcggaag cgcggctgcc attggaggct gcttttacct gcgcggggcc cggggcgcaa
121 agtccgaggc gccgggggga ggaggcggcg gacggcagcg caggtgggcc cgcgctctcg
181 gccctgcaag atgcccctga agctgcgggg gaagaagaag gccaagtcca aggagaccgc
241 cgggctggtg gagggcgagc cgacgggcgc gggcggcggg agcctctcag cgtcccgggc
301 tcccgcacgc aggctggtct tccacgcgca gctggcgcac ggtagtgcca cgggccgagt
361 ggagggcttc tccagcatcc aggagctcta cgcccagatc gcgggcgcgt ttgaaatctc
421 gccgtcggag atcttatatt gcactttaaa cacacctaaa attgacatgg aaagactctt
481 aggaggacaa ctaggactag aagatttcat atttgcccat gtgaaaggaa tcgaaaaaga
541 agtgaatgtg tataaatctg aggattcact tggtctcacc attacagata atggtgttgg
601 ctatgctttt ataaagagaa ttaaagatgg tggtgttatt gactcagtta aaacaatctg
661 tgttggggat catattgaat ccataaatgg agaaaatatt gttgggtggc gtcactatga
721 tgttgctaag aagttaaagg aattaaaaaa ggaggaactc tttactatga agttaataga
781 acctaagaag gcatttgaaa tagagccgag gtcaaaggct ggaaagtcat caggagaaaa
841 aattggttgt ggaagggcaa cacttcgcct gagatcaaaa ggtcctgcca ccgtggaaga
901 aatgccttct gaaaccaaag caaaggcaat tgaaaagatt gatgatgttc ttgagttgta
961 catgggaatt cgagatattg atttagccac cacaatgttt gaagctggaa aggacaaagt
1021 aaatccagat gaatttgctg tggcacttga cgaaactctt ggagactttg cgttcccaga
1081 cgaatttgtc tttgatgttt ggggagtcat tggtgatgcc aaacgaagag gattatgatg
1141 tgtacactcc atctctgaag aaacaaccca tcgttctttt ttttttctct tttttaaaaa
1201 gtcctataag atctgttttt ggacaccttt actaactctg gtttaatttc atgtgtatgg
1261 aatatattct ttgaaatata attttggtaa ttttgatttc tgggcacttt ttaacattgc
1321 tgatgtagta tgcttaagag aaatgaccta aataaggatc aattgtaata ttcattcaaa
1381 aggtttttaa aagtaagttt taaggagtat ttctcgacag atgattttct tctccattaa
1441 tacccatgct ttgtttttca catataaata gatgatttca atagctttgt agtttttttt
1501 tcaaaatctt aatgtaaact aggattggag tatgatttac ctcatagtat cttcactgtg
1561 ttatcctagt ttgaacagga tatgttcagg aaatgaaagg tgaattatgc cccttattgg
1621 tctagaagca ttggtttttt tttgatcctc tgagtaaggg aaggaagatt cctgtggcat
1681 gttgatttct atggccaact ttctctcttt gtaaaacaaa gattgattga ttttcttgta
1741 tgcttcttta tacatgctct taaaacttgt ggttgaaatc tgtgctgtgt gtgtgtgtct
1801 ctgcatgtgt aaaagaaggg taaaaaagag atgggtaggg tagaactact tgcatttgat
1861 ttttttttca gtccttaaaa cattatttct ttttttcact catagccact tttatgttac
1921 cttttataag cactccaggg aagattttat atttttttgt agagtttttg gaaagatatt
1981 tactcaaaat aactatgctt tagaactttt tttttttttt tttggttaaa cagcagcact
2041 ttttagttcc ctaaacttta gaagaaatgc tatcagaaat agatttcctt ccagtggaaa
2101 gaaaggagga agggagaatt gagaaaatat attagtctat tattttagag ttctaataca
2161 ctctaaatta tagagaaaat tgagagtaaa tgactgtctt ttcactctta tttgacattt
2221 cgtaggtgta agagaaatgg aaatgaatgg tttcaacaaa gatcatttaa tacagcagag
2281 catggcatga ccaagcatct ttgtaaagtg ttagatggaa aatgctgtgt gctgccatgg
2341 taatcagaaa taataacctg ttagggatgt attctaggaa atcagaagta gttctctttt
2401 cttgctggat tattgcttag ataactcttg ttttctggta aaactttagt tgtattgcca
2461 tccactcctt tttcaaatga gtttaatgcc ataaagctga tattctttgt ccgattaatt
2521 tgaaatctgc acagaagctg ttttagtcat taatgtgtaa caaaagtagc ttatagaata
2581 tggactgcct tattgctgtt gcttatcatt tgaaaataaa atccagctca ggttgtaact
2641 tgttggtact tgtttagtga gttcgttttg gaggttctga aatacctatt aattcttaat
2701 attacctctc ttggaaagac acaaaaaaag agctgttatt tttaggcata agatgactta
2761 ggaggcccat agaaacgttc tcgtttaaac aacaacaaca aaataaattt atcagcacta
2821 gaaaaaaaaa aaaaaaa
//