LOCUS BC036067 3007 bp mRNA linear HUM 12-JAN-2007
DEFINITION Homo sapiens chromosome 1 open reading frame 115, mRNA (cDNA clone
MGC:33695 IMAGE:5274863), complete cds.
ACCESSION BC036067
VERSION BC036067.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3007)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3007)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: f Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542689.
FEATURES Location/Qualifiers
source 1..3007
/db_xref="H-InvDB:HIT000051609"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33695 IMAGE:5274863"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3007
/gene="C1orf115"
/gene_synonym="RP11-322F10.4"
/db_xref="GeneID:79762"
/db_xref="HGNC:HGNC:25873"
CDS 84..512
/gene="C1orf115"
/gene_synonym="RP11-322F10.4"
/codon_start=1
/product="chromosome 1 open reading frame 115"
/protein_id="AAH36067.1"
/db_xref="GeneID:79762"
/db_xref="HGNC:HGNC:25873"
/translation="MTVGARLRSKAESSLLRRGPRGRGRTEGDEEAAAILEHLEYADE
AEAAAESGTSAADERGPGTRGARRVHFALLPERYEPLEEPAPSEQPRKRYRRKLKKYG
KNVGKVIIKGCRYVVIGLQGFAAAYSAPFAVATSVVSFVR"
BASE COUNT 775 a 693 c 883 g 656 t
ORIGIN
1 gtccgggctg gggcggagga gcgggcgggg accaaaggtt ggtgtctttg cgctcggacc
61 ttcgccagag gggccgggac atcatgacgg tgggagccag gctccgaagc aaggcggaga
121 gcagcctcct gcgccgcggg ccccgagggc gagggcgaac cgagggggac gaggaggcgg
181 ccgccatcct ggagcacctg gagtacgcgg acgaggcgga ggcggcggcc gagagcggga
241 cgagcgcggc ggacgagcgg ggcccgggga cccggggcgc gcggagggtg cacttcgccc
301 tcctgcccga gcgctacgag ccactggagg agccggcgcc gagcgagcag cccaggaaga
361 ggtaccggag gaagctgaag aagtacggca agaatgtcgg gaaggtcatc atcaaaggat
421 gccgctacgt ggtcatcggc ctgcaaggct tcgctgcagc ctactccgcc ccgtttgcgg
481 tagccaccag cgtggtatcc ttcgtgcgct aatgggagct gctgtggcag gtgcccccag
541 agtgaacggg agcccctgct gtgggaactt tgtgaatcct ggagcatctc agacttgaac
601 acacagcata tttggaagag aaaacatgcc tttctttgtt gaatcacatt agtatgatga
661 gtgagtcatc cctgcccatc tgctgagctt ctcacatctc tcagtcacac gtggacccag
721 tggtcaatcc tgcagagaat tcggcggagg ttaggtttgg gagtggagct agcgtgctaa
781 agccagagcc ttcacgtgaa ggtggcaggc actggggcgg aagccaacac tcaacagatg
841 caagcagtgt gggtgtgcag cagaacagtg atcttggggg aggaagagga tgttactaga
901 gtcagatgat ttgctgtatt ctcctgaaag gtcgtaggct gacaggcgct cacattcctt
961 ggctgcctcg gttctgaggg cagctaagga gctgtttatt cctcaagtca tgctccccga
1021 tctccttcct ctaccactct gtcaccagga gtttaattac aggcttgagg agaagaaagg
1081 aagaaaagat atcttgatgc tttgaaaact gtgttggcag tgtggcatga ctgtttaaag
1141 tagataaaac cttgtcattt taccccatcc ctgcatgact gtgaagctgg cgaggaagga
1201 ggaagaaggg caagttcaga tgcaggctgg gtggctggga caggttggct aagggactac
1261 tctggagggc tcttctgcct ggcattgccc acttcggccc agccacgtgt ttgcagcgac
1321 cagagtccct gcaaaggtgt ggctggctgt ggtcagggtg ctactagcac catcagcgca
1381 ctcccgccat tggctcagct cctctctgcc agtccaacta agagtgcttt gtcctgggtg
1441 ggacataggg gctgagagag atggggggag acataacacc caggaatgaa aatacagatt
1501 tagagaagga accagtaagt aggagacaga tgtgaaggaa atggaaatga ggcaagagga
1561 cgttggaaga gagaagtttg ctgtccagga gccaggtctg gagcatcagt gtgagggagt
1621 tcaggtaggc tgggcctgtg cctctaggta gggacaaggg aggctgggta gccagggctg
1681 gtgcttaaaa cccctgaggc catgagctca ttggctgcct ttgtagcatc ctgtcttctt
1741 ctgtgctgcc tggtttgacc tcatctcacc tggattcaaa gggtaaggtg ggcatgggtc
1801 ttgggcctga cacccaccaa ggatgacctg tggactgcca tcggatgctg aacagggaga
1861 tgaaaggagg tcctcttacc atacccctct gccaaccccc cagtaggcca ctgttctgac
1921 tttgtttcca gaatatccag aaatccaaag gggctgttgc tgaacagtct gcaggaccag
1981 tgacagcacc tacctgttgt cccaaggcat acaaaggagg cctcaacgct catgcttctc
2041 taatcaagcc ctaccaagac agacagaaag acagacagaa aaaaggaagg ggtagaggag
2101 aaggttgaag ctgtggagct agactctgct tcacttcctg aagcttcaac ttcatgtcga
2161 agattcactg ggacccaatt cctgcattgt taatatttgt gaggaaaagt gaaacaagtg
2221 atctggtttt agcccagatg atgaaagtgg atatggcaca ttttcacaca cgtgagataa
2281 ttacagcttg ccccacaaca ctgggtgttg gagaaaggga gagatagtca taagtggaag
2341 aaaaagccaa gcatagtgag tgggaaagag agtgagagcc tgtgcaggct gctgacgagc
2401 cccaggcagc ccacaagttt ctcgtgggga gatggaggca gagcccaggg taggggacag
2461 agctgctggg gcctttcctt gcctgggaat ctgtcccagg aagagcttcc ccactcccat
2521 cccccaaatt ggaaaaaccg tacattcaag cctgtttggc cctgaaattc ttaagaatct
2581 ggttaagaat taactcacta atgtcaaaag tcaaaacctc ctaggggttg tcctgggagt
2641 caggttcacg ggtacagaag atgaatctca gatgtcactc aacctgagcc gtcattctct
2701 gtggcagggc tgccctgggt ttctcttact caatccctgg agtgtaagca tttggattgt
2761 gtcacagatt acctttttac cttttctttc tttttttttc tttttttcaa tatcagtgcc
2821 cacaccttac tgagtattga gttttagagc tttcgcttga tgtgcttgac caagagactt
2881 cttttgtatc cttttcttgt cctatgatgt aaataaaagc ctcgatttat gtaaaaaaaa
2941 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa gaaaaaaaaa
3001 aaaaaaa
//