LOCUS BC036065 3855 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens WW domain containing E3 ubiquitin protein ligase 1,
mRNA (cDNA clone MGC:33686 IMAGE:5296005), complete cds.
ACCESSION BC036065
VERSION BC036065.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3855)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3855)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: k Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33946331.
FEATURES Location/Qualifiers
source 1..3855
/db_xref="H-InvDB:HIT000051608"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33686 IMAGE:5296005"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3855
/gene="WWP1"
/gene_synonym="AIP5"
/gene_synonym="DKFZp434D2111"
/gene_synonym="hSDRP1"
/gene_synonym="Tiul1"
/db_xref="GeneID:11059"
/db_xref="HGNC:HGNC:17004"
/db_xref="MIM:602307"
CDS 285..3053
/gene="WWP1"
/gene_synonym="AIP5"
/gene_synonym="DKFZp434D2111"
/gene_synonym="hSDRP1"
/gene_synonym="Tiul1"
/codon_start=1
/product="WW domain containing E3 ubiquitin protein ligase
1"
/protein_id="AAH36065.1"
/db_xref="GeneID:11059"
/db_xref="HGNC:HGNC:17004"
/db_xref="MIM:602307"
/translation="MATASPRSDTSNNHSGRLQLQVTVSSAKLKRKKNWFGTAIYTEV
VVDGEITKTAKSSSSSNPKWDEQLTVNVTPQTTLEFQVWSHRTLKADALLGKATIDLK
QALLIHNRKLERVKEQLKLSLENKNGIAQTGELTVVLDGLVIEQENITNCSSSPTIEI
QENGDALHENGEPSARTTARLAVEGTNGIDNHVPTSTLVQNSCCSYVVNGDNTPSSPS
QVAARPKNTPAPKPLASEPADDTVNGESSSFAPTDNASVTGTPVVSEENALSPNCTST
TVEDPPVQEILTSSENNECIPSTSAELESEARSILEPDTSNSRSSSAFEAAKSRQPDG
CMDPVRQQSGNANTETLPSGWEQRKDPHGRTYYVDHNTRTTTWERPQPLPPGWERRVD
DRRRVYYVDHNTRTTTWQRPTMESVRNFEQWQSQRNQLQGAMQQFNQRYLYSASMLAA
ENDPYGPLPPGWEKRVDSTDRVYFVNHNTKTTQWEDPRTQGLQNEEPLPEGWEIRYTR
EGVRYFVDHNTRTTTFKDPRNGKSSVTKGGPQIAYERGFRWKLAHFRYLCQSNALPSH
VKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGLDYGGLAREWFFLLSHEVL
NPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAMALFHGKFIDTGFSLPF
YKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSVDMEILGKVTSHDLK
LGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELE
VMLCGMQEVDLADWQRNTVYRHYTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRL
PLGGFAELMGSNGPQKFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIE
ETEGFGQE"
BASE COUNT 1217 a 722 c 842 g 1074 t
ORIGIN
1 gaggggctgc tggcggcctg ggctgccggg gccgacgcct gggtggctgc tgccgccgcg
61 cctgctgcga gatggcgatc ttgggcgcgg aagggtgagg gcgcccgccg caggaggagg
121 tgccgctgcc gtggccgccc ggctgccggg agccgacagc ttcgcgccgg ggttgtctcc
181 tcacagacta tgagctcctt gaaagaggga atcgtgtctt actcatcttt gtatccccag
241 tgtctagcag ttcctgatac atagttttag ctgaattttg ggacatggcc actgcttcac
301 caaggtctga tactagtaat aaccacagtg gaaggttgca gttacaggta actgtttcta
361 gtgccaaact taaaagaaaa aagaactggt tcggaacagc aatatataca gaagtagttg
421 tagatggaga aattacgaaa acagcaaaat ccagtagttc ttctaatcca aaatgggatg
481 aacagctaac tgtaaatgtt acgccacaga ctacattgga atttcaagtt tggagccatc
541 gcactttaaa agcagatgct ttattaggaa aagcaacgat agatttgaaa caagctctgt
601 tgatacacaa tagaaaattg gaaagagtga aagaacaatt aaaactttcc ttggaaaaca
661 agaatggcat agcacaaact ggtgaattga cagttgtgct tgatggattg gtgattgagc
721 aagaaaatat aacaaactgc agctcatctc caaccataga aatacaggaa aatggtgatg
781 ccttacatga aaatggagag ccttcagcaa ggacaactgc caggttggct gttgaaggca
841 cgaatggaat agataatcat gtacctacaa gcactctagt ccaaaactca tgctgctcgt
901 atgtagttaa tggagacaac acaccttcat ctccgtctca ggttgctgcc agacccaaaa
961 atacaccagc tccaaaacca ctcgcatctg agcctgccga tgacactgtt aatggagaat
1021 catcctcatt tgcaccaact gataatgcgt ctgtcacggg tactccagta gtgtctgaag
1081 aaaatgcctt gtctccaaat tgcactagta ctactgttga agatcctcca gttcaagaaa
1141 tactgacttc ctcagaaaac aatgaatgta ttccttctac cagtgcagaa ttggaatctg
1201 aagctagaag tatattagag cctgacacct ctaattctag aagtagttct gcttttgaag
1261 cagccaaatc aagacagcca gatgggtgta tggatcctgt acggcagcag tctgggaatg
1321 ccaacacaga aaccttgcca tcagggtggg aacaaagaaa agatcctcat ggtagaacct
1381 attatgtgga tcataatact cgaactacca catgggagag accacaacct ttacctccag
1441 gttgggaaag aagagttgat gatcgtagaa gagtttatta tgtggatcat aacaccagaa
1501 caacaacgtg gcagcggcct accatggaat ctgtccgaaa ttttgaacag tggcaatctc
1561 agcggaacca attgcaggga gctatgcaac agtttaacca acgatacctc tattcggctt
1621 caatgttagc tgcagaaaat gacccttatg gacctttgcc accaggctgg gaaaaaagag
1681 tggattcaac agacagggtt tactttgtga atcataacac aaaaacaacc cagtgggaag
1741 atccaagaac tcaaggctta cagaatgaag aacccctgcc agaaggctgg gaaattagat
1801 atactcgtga aggtgtaagg tactttgttg atcataacac aagaacaaca acattcaaag
1861 atcctcgcaa tgggaagtca tctgtaacta aaggtggtcc acaaattgct tatgaacgcg
1921 gctttaggtg gaagcttgct cacttccgtt atttgtgcca gtctaatgca ctacctagtc
1981 atgtaaagat caatgtgtcc cggcagacat tgtttgaaga ttccttccaa cagattatgg
2041 cattaaaacc ctatgacttg aggaggcgct tatatgtaat atttagagga gaagaaggac
2101 ttgattatgg tggcctagcg agagaatggt ttttcttgct ttcacatgaa gttttgaacc
2161 caatgtattg cttatttgag tatgcgggca agaacaacta ttgtctgcag ataaatccag
2221 catcaaccat taatccagac catctttcat acttctgttt cattggtcgt tttattgcca
2281 tggcactatt tcatggaaag tttatcgata ctggtttctc tttaccattc tacaagcgta
2341 tgttaagtaa aaaacttact attaaggatt tggaatctat tgatactgaa ttttataact
2401 cccttatctg gataagagat aacaacattg aagaatgtgg cttagaaatg tacttttctg
2461 ttgacatgga gattttggga aaagttactt cacatgacct gaagttggga ggttccaata
2521 ttctggtgac tgaggagaac aaagatgaat atattggttt aatgacagaa tggcgttttt
2581 ctcgaggagt acaagaacag accaaagctt tccttgatgg ttttaatgaa gttgttcctc
2641 ttcagtggct acagtacttc gatgaaaaag aattagaggt tatgttgtgt ggcatgcagg
2701 aggttgactt ggcagattgg cagagaaata ctgtttatcg acattataca agaaacagca
2761 agcaaatcat ttggttttgg cagtttgtga aagagacaga caatgaagta agaatgcgac
2821 tattgcagtt cgtcactgga acctgccgtt tacctctagg aggatttgct gagctcatgg
2881 gaagtaatgg gcctcaaaag ttttgcattg aaaaagttgg caaagacact tggttaccaa
2941 gaagccatac atgttttaat cgcttggatc taccaccata taagagttat gaacaactaa
3001 aggaaaaact tctttttgca atagaagaga cagagggatt tggacaagaa tgaatgtggc
3061 ttcttatttt ggaggagctc ttgcatttaa ataccccagc cgagaaaaat tgcacagata
3121 gtgtatataa gctgttcatt ctgtacagtg aattttccga acctctcaaa gtatgttttc
3181 cgttcttcca cagaaatatg caaaacagtt catccttttc tactttattt attgttccct
3241 tgaaatgact gaccaggaaa aagatcatcc ttaaattttg aagcaagtga gagactttat
3301 taaaaataca tatatatcta tataaacata tatgatagtg gctctagttt tatagagctc
3361 caagtgtatt aaacatgaca gccattcatt cataaagatc tggatttgct ttaccttgtt
3421 aatattatct aggggaaaaa gtgcaaattg ctccatgttc ttctctccct tatgtaacat
3481 ctcctgaggg tgtttagttg catggctgtt cagaaaggta ttaagggctt aggccaaatc
3541 ttactttgag tatgttaaaa aaaaaaaaat gctgctggct tttctgaaga caggtgcttg
3601 aacttgtcag tttgttttaa ataaatacaa tagttgaaaa tttttctctg ttacatcagt
3661 aatattgtta aagtaatgga tagaaccata acttacacat gaaagtcata tactagatcc
3721 aatactattt agtttattat cgaaattgga aggattcatt gagcagcata gaagtttgtt
3781 tacatgttac tttgagatgc taggtatttg tggaattaaa aagaatcagg ctcttttgca
3841 aaaaaaaaaa aaaaa
//