LOCUS BC036034 3652 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens lysophosphatidic acid receptor 1, mRNA (cDNA clone
MGC:33157 IMAGE:5272431), complete cds.
ACCESSION BC036034
VERSION BC036034.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3652)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3652)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 48 Row: d Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45580698.
FEATURES Location/Qualifiers
source 1..3652
/db_xref="H-InvDB:HIT000051594"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33157 IMAGE:5272431"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3652
/gene="LPAR1"
/gene_synonym="edg-2"
/gene_synonym="Gpcr26"
/gene_synonym="GPR26"
/gene_synonym="LPA1"
/gene_synonym="Mrec1.3"
/gene_synonym="rec.1.3"
/gene_synonym="vzg-1"
/gene_synonym="VZG1"
/db_xref="GeneID:1902"
/db_xref="HGNC:HGNC:3166"
/db_xref="MIM:602282"
CDS 386..1480
/gene="LPAR1"
/gene_synonym="edg-2"
/gene_synonym="Gpcr26"
/gene_synonym="GPR26"
/gene_synonym="LPA1"
/gene_synonym="Mrec1.3"
/gene_synonym="rec.1.3"
/gene_synonym="vzg-1"
/gene_synonym="VZG1"
/codon_start=1
/product="lysophosphatidic acid receptor 1"
/protein_id="AAH36034.1"
/db_xref="GeneID:1902"
/db_xref="HGNC:HGNC:3166"
/db_xref="MIM:602282"
/translation="MAAISTSIPVISQPQFTAMNEPQCFYNESIAFFYNRSGKHLATE
WNTVSKLVMGLGITVCIFIMLANLLVMVAIYVNRRFHFPIYYLMANLAAADFFAGLAY
FYLMFNTGPNTRRLTVSTWLLRQGLIDTSLTASVANLLAIAIERHITVFRMQLHTRMS
NRRVVVVIVVIWTMAIVMGAIPSVGWNCICDIENCSNMAPLYSDSYLVFWAIFNLVTF
VVMVVLYAHIFGYVRQRTMRMSRHSSGPRRNRDTMMSLLKTVVIVLGAFIICWTPGLV
LLLLDVCCPQCDVLAYEKFFLLLAEFNSAMNPIIYSYRDKEMSATFRQILCCQRSENP
TGPTEGSDRSASSLNHTILAGVHSNDHSVV"
BASE COUNT 1034 a 769 c 788 g 1061 t
ORIGIN
1 ggtgtttggg ggcgcgcgtg cgagtgccag tgagagtgtg ggtgcgcgct gtgggccgcg
61 gcgcgggtgg gtggccgtgc gttcttgcga gccggcctgc aggaggcgag gctcccctgg
121 cctcccgcac ccagcggcgg accgagcccc tggagggaag ttgccgcagc cgcccgggcc
181 gccggccctc ctgtcccgcg ccaggtggac gtctgattta tgaagctccc catccaccta
241 tctgagtacc tgacttctca ggactgacac ctacagcatc aggtacacag cttctcctag
301 catgacttcg atctgatcag caaacaagaa aatttgtctc ccgtagttct ggggcgtgtt
361 caccacctac aaccacagag ctgtcatggc tgccatctct acttccatcc ctgtaatttc
421 acagccccag ttcacagcca tgaatgaacc acagtgcttc tacaacgagt ccattgcctt
481 cttttataac cgaagtggaa agcatcttgc cacagaatgg aacacagtca gcaagctggt
541 gatgggactt ggaatcactg tttgtatctt catcatgttg gccaacctat tggtcatggt
601 ggcaatctat gtcaaccgcc gcttccattt tcctatttat tacctaatgg ctaatctggc
661 tgctgcagac ttctttgctg ggttggccta cttctatctc atgttcaaca caggacccaa
721 tactcggaga ctgactgtta gcacatggct ccttcgtcag ggcctcattg acaccagcct
781 gacggcatct gtggccaact tactggctat tgcaatcgag aggcacatta cggttttccg
841 catgcagctc cacacacgga tgagcaaccg gcgggtagtg gtggtcattg tggtcatctg
901 gactatggcc atcgttatgg gtgctatacc cagtgtgggc tggaactgta tctgtgatat
961 tgaaaattgt tccaacatgg cacccctcta cagtgactct tacttagtct tctgggccat
1021 tttcaacttg gtgacctttg tggtaatggt ggttctctat gctcacatct ttggctatgt
1081 tcgccagagg actatgagaa tgtctcggca tagttctgga ccccggcgga atcgggatac
1141 catgatgagt cttctgaaga ctgtggtcat tgtgcttggg gcctttatca tctgctggac
1201 tcctggattg gttttgttac ttctagacgt gtgctgtcca cagtgcgacg tgctggccta
1261 tgagaaattc ttccttctcc ttgctgaatt caactctgcc atgaacccca tcatttactc
1321 ctaccgcgac aaagaaatga gcgccacctt taggcagatc ctctgctgcc agcgcagtga
1381 gaaccccacc ggccccacag aaggctcaga ccgctcggct tcctccctca accacaccat
1441 cttggctgga gttcacagca atgaccactc tgtggtttag aacggaaact gagatgagga
1501 accagccgtc ctctcttgga ggataaacag cctcccccta cccaattgcc agggcaaggt
1561 ggggtgtgag agaggagaaa agtcaactca tgtacttaaa cactaaccaa tgacagtatt
1621 tgttcctgga ccccacaaga cttgacatat attgaaaatt agcttatgtg acaaccctca
1681 tcttgatccc catcccttct gaaagtagga agttggagct cttgcaatgg aattcaagaa
1741 cagactctgg agtgtccatt tagactacac taactagact tttaaaagat tttgtgtggt
1801 ttggtgcaag tcagaataaa ttctggctag ttgaatccac aacttcattt atatacaggc
1861 ttcccttttt tatttttaaa ggatacgttt cacttaataa acacgtttat gcctatcagc
1921 atgtttgtga tggatgagac tatggactgc ttttaaacta ccataattcc attttttccc
1981 ttacatagga aaactgtaag ttggaattat cttttgttta gaaagcatgc atgtaatgta
2041 tgtatgcagt atgccttact taaaaagatt aaaaggatac taatgttaaa tcttctagga
2101 aatagaacct agacttcaaa gccagtattt gtttaggtca tgaagcaaac aatgctctaa
2161 tcacaatatt aactgtttaa ttaaaatgtt gtaacaagta taaaacaggg aatgtaagtt
2221 tattaccaaa gtgatatgta ttccaaaaaa gtcatagaag atgaagcact ataatattgt
2281 tcccatatat ttaaaatacc caagtacatt ctaattacca gtatatcaga ggaaaatttt
2341 cgtagtcttt gtaaaataat atactcatca tagaaaactt gaaaaatgca gaaatgtata
2401 aaaaagcaaa aatgattact gataatatca caacccagaa gtaaccacct ttaaaaagca
2461 acccccatgt atgcctatat gtgtattgta tacttttttt acataattgg agtcatactg
2521 taaacagttt tataagtaga tctttttcat tgcaaaattg ccacattttc ttatggcatt
2581 aaaaatttta caaaaacata attttaatgg ctatattata ttccatttaa tggatgcaac
2641 tcagtttatt taaccattcc catgttgtta actatttagg ttgtttctaa ttttcattat
2701 tataaagttg cagaaatttg gtgtacataa aactgtctcc atataattga ttattaggat
2761 atattcccat gaaggattct ttttttaaaa aaatgtgaaa tgtcatcttg tacttacacc
2821 tttcatgaaa agggatttcc tgcttttgta ctgcatgggt ggcagttgtg aggaaaagcc
2881 agtcaaatga cctttttaca aaagaaatgc agtggtcact tcagttgaga gtgacttttt
2941 aatacaacaa gatcaactag aagaattcaa ctgtctcaag aatcaaggta ccccaatata
3001 tctcgcaatt ccaaactttg tttgagggac tcgttatcca gctcttggta gccacacctg
3061 caatgtaaaa tggaagaaaa tgcaaagaaa ccaaatgtgc cgagtgaata aaggattgtc
3121 atatcaatta gtgtgggtcc atctgtagca aatgggttga gtgtgtcagt atgtggttgg
3181 ttactgtgta ttcgccagga atcaccccga taggctgcca ccctattagg tgatacctgt
3241 ttaatatgtt gtccaggtag actagtagtt gcatcagttt gctgtaacaa gtaaccagtg
3301 aggtaacaca gtggtgaagc aggtcagggg aggtcaggag gatgtctgag agaaagaagt
3361 ccgggagatg aatggctgtc taggaaggag gatgtcagtg cacggttagt gtttgagcag
3421 agggcagact tgtaaagtac ctgtagtgaa aagaatgtgg ggacccgatt agcagaaagg
3481 tgtttgcacg tactttatac aaaatacaga atactttata ttggaagtga aagaaatgaa
3541 cgtggacttt tacacatgtg catatttttc tggaggctat atggattatt tgaaatgaaa
3601 agcatactaa ttggacttta ataaatcatt ttcaatcaaa aaaaaaaaaa aa
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