LOCUS BC035997 1726 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lumican, mRNA (cDNA clone MGC:32797 IMAGE:4688606),
complete cds.
ACCESSION BC035997
VERSION BC035997.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1726)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1726)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 41 Row: i Column: 19.
FEATURES Location/Qualifiers
source 1..1726
/db_xref="H-InvDB:HIT000051576"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:32797 IMAGE:4688606"
/tissue_type="Lung"
/clone_lib="NIH_MGC_77"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1726
/gene="LUM"
/gene_synonym="SLRR2D"
/db_xref="GeneID:4060"
/db_xref="HGNC:HGNC:6724"
/db_xref="MIM:600616"
CDS 64..1080
/gene="LUM"
/gene_synonym="SLRR2D"
/codon_start=1
/product="lumican"
/protein_id="AAH35997.1"
/db_xref="GeneID:4060"
/db_xref="HGNC:HGNC:6724"
/db_xref="MIM:600616"
/translation="MSLSAFTLFLALIGGTSGQYYDYDFPLSIYGQSSPNCAPECNCP
ESYPSAMYCDELKLKSVPMVPPGIKYLYLRNNQIDHIDEKAFENVTDLQWLILDHNLL
ENSKIKGRVFSKLKQLKKLHINHNNLTESVGPLPKSLEDLQLTHNKITKLGSFEGLVN
LTFIHLQHNRLKEDAVSAAFKGLKSLEYLDLSFNQIARLPSGLPVSLLTLYLDNNKIS
NIPDEYFKRFNALQYLRLSHNELADSGIPGNSFNVSSLVELDLSYNKLKNIPTVNENL
ENYYLEVNQLEKFDIKSFCKILGPLSYSKIKHLRLDGNRISETSLPPDMYECLRVANE
VTLN"
BASE COUNT 564 a 332 c 292 g 538 t
ORIGIN
1 atctgcttta agaattaacg aaagcagtgt caagacagta aggattcaaa ccatttgcca
61 aaaatgagtc taagtgcatt tactctcttc ctggcattga ttggtggtac cagtggccag
121 tactatgatt atgattttcc cctatcaatt tatgggcaat catcaccaaa ctgtgcacca
181 gaatgtaact gccctgaaag ctacccaagt gccatgtact gtgatgagct gaaattgaaa
241 agtgtaccaa tggtgcctcc tggaatcaag tatctttacc ttaggaataa ccagattgac
301 catattgatg aaaaggcctt tgagaatgta actgatctgc agtggctcat tctagatcac
361 aaccttctag aaaactccaa gataaaaggg agagttttct ctaaattgaa acaactgaag
421 aagctgcata taaaccacaa caacctgaca gagtctgtgg gcccacttcc caaatctctg
481 gaggatctgc agcttactca taacaagatc acaaagctgg gctcttttga aggattggta
541 aacctgacct tcatccatct ccagcacaac cggctgaaag aggatgctgt ttcagctgct
601 tttaaaggtc ttaaatcact cgaatacctt gacttgagct tcaatcagat agccagactg
661 ccttctggtc tccctgtctc tcttctaact ctctacttag acaacaataa gatcagcaac
721 atccctgatg agtatttcaa gcgttttaat gcattgcagt atctgcgttt atctcacaac
781 gaactggctg atagtggaat acctggaaat tctttcaatg tgtcatccct ggttgagctg
841 gatctgtcct ataacaagct taaaaacata ccaactgtca atgaaaacct tgaaaactat
901 tacctggagg tcaatcaact tgagaagttt gacataaaga gcttctgcaa gatcctgggg
961 ccattatcct actccaagat caagcatttg cgtttggatg gcaatcgcat ctcagaaacc
1021 agtcttccac cggatatgta tgaatgtcta cgtgttgcta acgaagtcac tcttaattaa
1081 tatctgtatc ctggaacaat attttatggt tatgtttttc tgtgtgtcag ttttcatagt
1141 atccatattt tattactgtt tattacttcc atgaatttta aaatctgagg gaaatgtttt
1201 gtaaacattt atttttttta aagaaaagat gaaaggcagg cctatttcat cacaagaaca
1261 cacacatata cacgaataga catcaaactc aatgctttat ttgtaaattt agtgtttttt
1321 tatttctact gtcaaatgat gtgcaaaacc ttttactggt tgcatggaaa tcagccaagt
1381 tttataatcc ttaaatctta atgttcctca aagcttggat taaatacata tggatgttac
1441 tctcttgcac caaattatct tgatacattc aaatttgtct ggttaaaaaa taggtggtag
1501 atattgaggc caagaatatt gcaaaataca tgaagcctca tgcacttaaa gaagtatttt
1561 tagaataaga atttgcatac ttacctagtg aaacttttct agaattattt ttcactctaa
1621 gtcatgtatg tttctctttg attatttgca tgttatgttt aataagctac tagcaaaata
1681 aaacatagca aatgacaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//