LOCUS BC035898 2196 bp mRNA linear HUM 16-NOV-2007
DEFINITION Homo sapiens gap junction protein, delta 4, 40.1kDa, mRNA (cDNA
clone IMAGE:5240397), partial cds.
ACCESSION BC035898
VERSION BC035898.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2196)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2196)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 78 Row: i Column: 12.
FEATURES Location/Qualifiers
source 1..2196
/db_xref="H-InvDB:HIT000051546"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5240397"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2196
/gene="GJD4"
/gene_synonym="CX40.1"
/gene_synonym="RP11-425A6.2"
/db_xref="GeneID:219770"
/db_xref="HGNC:HGNC:23296"
CDS <1..628
/gene="GJD4"
/gene_synonym="CX40.1"
/gene_synonym="RP11-425A6.2"
/codon_start=2
/product="GJD4 protein"
/protein_id="AAH35898.1"
/db_xref="GeneID:219770"
/db_xref="HGNC:HGNC:23296"
/translation="EAQQKRQRADRPEEQHQQGLLCGPRHVAVHHARARRARARELLR
GQESKEKVVQGPEGCLQQGPEEEVDDVAGRKVGHLEAAALPEWPRAASLPGGRLPGVG
AAAGAQRGERGSSVQDIDAEDGGGEEDAHALDQPEPQVRHGGEDVVANIGASRLQRVA
DKPLLLVLVDGSPRQDNHQHPQQHREDEPELSWKRGSGHGLITPNTLP"
BASE COUNT 642 a 489 c 533 g 532 t
ORIGIN
1 cgaggcccag cagaaaagac agcgcgctga ccgcccagag gaacagcatc agcagggact
61 tctctgtggg ccgcgacacg tagcagtcca ccacgcccgt gcacggaggg cgcgtgcaag
121 ggaacttctt cggggccagg aatccaaaga gaaagtagtg caaggccccg aaggctgcct
181 ccagcagggt ccggaggagg aggtggatga tgtagccggc cgaaaagtcg ggcacctgga
241 ggccgccgcg ctccccgaat ggccgcgggc agcgtctctg cccggaggcc ggctcccggg
301 ggtcggggca gcggcggggg cccagcgcgg cgagcgtggc tcctcggtgc aggacataga
361 cgctgaagac ggcggagggg aggaggacgc acacgccctg gatcagccag aaccgcaggt
421 gagacacggg ggagaagacg tcgtagcaaa cattggcgca tcccggctgc agcgtgttgc
481 agacaaacct ctcctgctcg tcctggtaga cgggtcgccc cgccaagaca atcaccagca
541 tccgcagcag catcgtgagg acgaaccaga gctttcctgg aagagaggaa gcgggcatgg
601 cctcatcacc ccgaatacac tgccctgagt aacagcttta aagtgtctat tggggctgag
661 attgggaaat tgaaacgtca ataagcatgt ctttagtttt ctgtttgttt gtgttgtcgt
721 tgttgttgtt gttggacaca gggtcgtgct atattgccca ggctggtctt gaactcctgg
781 cctcaagtgc tcctgccgcc ttggcctctt gagtagctgg gattacaggc atgagccacc
841 acacctgtca gcttgtcttt actcacagca agagcatcag gtagttcatt tgacaaatat
901 ttactgagca ctgaacatcc ttgtttgtaa gatgcttcaa gatgagtaga tttttaaaaa
961 gcattatatt aaaagtgttt taatctgtct gctaattcag acttttggta atgtctcctg
1021 gactgatagg tccagaaaga aagtttggct gagcaaatta atgatttaaa taagatttaa
1081 attttcttct taggagaata agccttttaa aagaggttgg tgtatttctg taactgccaa
1141 ttcgagctgc tgatttcagt aaatcttact tatgacaaca gtccagggat ctctatttaa
1201 tcacagggct tgtatttaat gttagtctac ggcccttgaa attgaatttc tttatgaaca
1261 ttccattttt cagatttttt aatcattcag aattcctctt ccccttttcc agttattagg
1321 aatgaatggg gcttgtcttt cttcaatgta tcgtgaagga atgacaccaa gctagaaaac
1381 caaaataact gtcaagccct attttcatgg caccggccaa ctgtttcgaa acatgtttaa
1441 aactcagcca aaataacttg tgaatattgt gttttgtgat gagagaaaca tcgcctgaca
1501 tcataaaaac aaaacaaaaa taaatatata aagacagtca aacaaagaat aatatcatta
1561 tgtgatgagt cattgagttg aacttttaac atcaagttgg ttttgtctaa atctacaaaa
1621 taatgagcca gaaaagtatc aactgcatct ccggcatata ttcatccttt tctgaccccc
1681 atacctctct gaaaatgtga gtcgtctgca ttaaacaaaa atctattatt ttctttgtta
1741 aaaaaaataa ctaaacttgg gatttggttt aaagtgcaca agagaaatgg ctactcctta
1801 aaaattaagc ttccaggcca ggcgtggtga ctcacgcctg taatcccagc actttgggaa
1861 gccaaggcgg gtggctcacg aggtcaggag atcgagacca tcctggctaa cacggtgaaa
1921 ccccgtctct actaaaaaca cagaaaatta gctgggcgtg gtggcaggcg cctgtagtcc
1981 cagctactcg ggaggctgag gcaggagaat cacttgaacc cgggaggcag aggttgcagt
2041 gagctgagat tgcatcactg cactccagcc tgggcaacag agtgagactc tgtctccaaa
2101 aacaaaaaaa aaaaatcaag cttccagaat aaaacctaaa ggtatcacct tctgattaaa
2161 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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