LOCUS BC035893 2170 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 40 (iron-regulated transporter),
member 1, mRNA (cDNA clone MGC:46472 IMAGE:5213437), complete cds.
ACCESSION BC035893
VERSION BC035893.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2170)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2170)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 78 Row: g Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543639.
FEATURES Location/Qualifiers
source 1..2170
/db_xref="H-InvDB:HIT000051544"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46472 IMAGE:5213437"
/tissue_type="Blood, adult leukocytes"
/clone_lib="NIH_MGC_118"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2170
/gene="SLC40A1"
/gene_synonym="FPN1"
/gene_synonym="HFE4"
/gene_synonym="IREG1"
/gene_synonym="MST079"
/gene_synonym="MSTP079"
/gene_synonym="MTP1"
/db_xref="GeneID:30061"
/db_xref="HGNC:HGNC:10909"
/db_xref="MIM:604653"
CDS 316..2031
/gene="SLC40A1"
/gene_synonym="FPN1"
/gene_synonym="HFE4"
/gene_synonym="IREG1"
/gene_synonym="MST079"
/gene_synonym="MSTP079"
/gene_synonym="MTP1"
/codon_start=1
/product="solute carrier family 40 (iron-regulated
transporter), member 1"
/protein_id="AAH35893.1"
/db_xref="GeneID:30061"
/db_xref="HGNC:HGNC:10909"
/db_xref="MIM:604653"
/translation="MTRAGDHNRQRGCCGSLADYLTSAKFLLYLGHSLSTWGDRMWHF
AVSVFLVELYGNSLLLTAVYGLVVAGSVLVLGAIIGDWVDKNARLKVAQTSLVVQNVS
VILCGIILMMVFLHKHELLTMYHGWVLTSCYILIITIANIANLASTATAITIQRDWIV
VVAGEDRSKLANMNATIRRIDQLTNILAPMAVGQIMTFGSPVIGCGFISGWNLVSMCV
EYVLLWKVYQKTPALAVKAGLKEEETELKQLNLHKDTEPKPLEGTHLMGVKDSNIHEL
EHEQEPTCASQMAEPFRTFRDGWVSYYNQPVFLAGMGLAFLYMTVLGSDCITTGYAYT
QGLSGSILSILMGASAITGIMGTVAFTWLRRKCGLVRTGLISGLAQLSCLILCVISVF
MPGSPLDLSVSPFEDIRSRFIQGESITPTKIPEITTEIYMSNGSNSANIVPETSPESV
PIISVSLLFAGVIAARIGLWSFDLTVTQLLQENVIESERGIINGVQNSMNYLLDLLHF
IMVILAPNPEAFGLLVLISVSFVAMGHIMYFRFAQNTLGNKLFACGPDAKEVRKENQA
NTSVV"
BASE COUNT 545 a 489 c 510 g 626 t
ORIGIN
1 cggcggagag agctggctca gggcgtccgc taggctcgga cgacctgctg agcctcccaa
61 accgcttcca taaggctttg cctttccaac ttcagctaca gtgttagcta agtttggaaa
121 gaaggaaaaa agaaaatccc tgggcccctt ttcttttgtt ctttgccaaa gtcgtcgttg
181 tagtcttttt gcccaaggct gttgtgtttt tagaggtgct atctccagtt ccttgcactc
241 ctgttaacaa gcacctcagc gagagcagca gcagcgatag cagccgcaga agagccagcg
301 gggtcgccta gtgtcatgac cagggcggga gatcacaacc gccagagagg atgctgtgga
361 tccttggccg actacctgac ctctgcaaaa ttccttctct accttggtca ttctctctct
421 acttggggag atcggatgtg gcactttgcg gtgtctgtgt ttctggtaga gctctatgga
481 aacagcctcc ttttgacagc agtctacggg ctggtggtgg cagggtctgt tctggtcctg
541 ggagccatca tcggtgactg ggtggacaag aatgctagac ttaaagtggc ccagacctcg
601 ctggtggtac agaatgtttc agtcatcctg tgtggaatca tcctgatgat ggttttctta
661 cataaacatg agcttctgac catgtaccat ggatgggttc tcacttcctg ctatatcctg
721 atcatcacta ttgcaaatat tgcaaatttg gccagtactg ctactgcaat cacaatccaa
781 agggattgga ttgttgttgt tgcaggagaa gacagaagca aactagcaaa tatgaatgcc
841 acaatacgaa ggattgacca gttaaccaac atcttagccc ccatggctgt tggccagatt
901 atgacatttg gctccccagt catcggctgt ggctttattt cgggatggaa cttggtatcc
961 atgtgcgtgg agtacgtcct gctctggaag gtttaccaga aaaccccagc tctagctgtg
1021 aaagctggtc ttaaagaaga ggaaactgaa ttgaaacagc tgaatttaca caaagatact
1081 gagccaaaac ccctggaggg aactcatcta atgggtgtga aagactctaa catccatgag
1141 cttgaacatg agcaagagcc tacttgtgcc tcccagatgg ctgagccctt ccgtaccttc
1201 cgagatggat gggtctccta ctacaaccag cctgtgtttc tggctggcat gggtcttgct
1261 ttcctttata tgactgtcct gggctctgac tgcatcacca cagggtacgc ctacactcag
1321 ggactgagtg gttccatcct cagtattttg atgggagcat cagctataac tggaataatg
1381 ggaactgtag cttttacttg gctacgtcga aaatgtggtt tggttcggac aggtctgatc
1441 tcaggattgg cacagctttc ctgtttgatc ttgtgtgtga tctctgtatt catgcctgga
1501 agccccctgg acttgtccgt ttctcctttt gaagatatcc gatcaaggtt cattcaagga
1561 gagtcaatta cacctaccaa gatacctgaa attacaactg aaatatacat gtctaatggg
1621 tctaattctg ctaatattgt cccggagaca agtcctgaat ctgtgcccat aatctctgtc
1681 agtctgctgt ttgcaggcgt cattgctgct agaatcggtc tttggtcctt tgatttaact
1741 gtgacacagt tgctgcaaga aaatgtaatt gaatctgaaa gaggcattat aaatggtgta
1801 cagaactcca tgaactatct tcttgatctt ctgcatttca tcatggtcat cctggctcca
1861 aatcctgaag cttttggctt gctcgtattg atttcagtct cctttgtggc aatgggccac
1921 attatgtatt tccgatttgc ccaaaatact ctgggaaaca agctctttgc ttgcggtcct
1981 gatgcaaaag aagttaggaa ggaaaatcaa gcaaatacat ctgttgtttg agacagttta
2041 actgttgcta tcctgttact agattatata gagcacatgt gcttattttg tactgcagaa
2101 ttccaataaa tggctgggtg ttttgctctg tttttccccc aaaaaaaaaa aaaaaaaaaa
2161 aaaaaaaaaa
//