LOCUS BC035718 2090 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens left-right determination factor 2, mRNA (cDNA clone
MGC:46222 IMAGE:5588729), complete cds.
ACCESSION BC035718
VERSION BC035718.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2090)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2090)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: e Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27436943.
FEATURES Location/Qualifiers
source 1..2090
/db_xref="H-InvDB:HIT000051484"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46222 IMAGE:5588729"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2090
/gene="LEFTY2"
/gene_synonym="LEFTA"
/gene_synonym="LEFTYA"
/gene_synonym="MGC46222"
/db_xref="GeneID:7044"
/db_xref="HGNC:HGNC:3122"
/db_xref="MIM:601877"
CDS 69..1169
/gene="LEFTY2"
/gene_synonym="LEFTA"
/gene_synonym="LEFTYA"
/gene_synonym="MGC46222"
/codon_start=1
/product="left-right determination factor 2"
/protein_id="AAH35718.1"
/db_xref="GeneID:7044"
/db_xref="HGNC:HGNC:3122"
/db_xref="MIM:601877"
/translation="MWPLWLCWALWVLPLAGPGAALTEEQLLGSLLRQLQLSEVPVLD
RADMEKLVIPAHVRAQYVVLLRRSHGDRSRGKRFSQSFREVAGRFLASEASTHLLVFG
MEQRLPPNSELVQAVLRLFQEPVPKAALHRHGRLSPRSAQARVTVEWLRVRDDGSNRT
SLIDSRLVSVHESGWKAFDVTEAVNFWQQLSRPRQPLLLQVSVQREHLGPLASGAHKL
VRFASQGAPAGLGEPQLELHTLDLRDYGAQGDCDPEAPMTEGTRCCRQEMYIDLQGMK
WAKNWVLEPPGFLAYECVGTCQQPPEALAFNWPFLGPRQCIASETASLPMIVSIKEGG
RTRPQVVSLPNMRVQKCSCASDGALVPRRLQP"
BASE COUNT 488 a 596 c 587 g 419 t
ORIGIN
1 ctgagaccct ccttcaacct ccctagagga cagccccact ctgcctcctg ctcccccagg
61 gcagcaccat gtggcccctg tggctctgct gggcactctg ggtgctgccc ctggctggcc
121 ccggggcggc cctgaccgag gagcagctcc tgggcagcct gctgcggcag ctgcagctca
181 gcgaggtgcc cgtactggac agggccgaca tggagaagct ggtcatcccc gcccacgtga
241 gggcccagta tgtagtcctg ctgcggcgca gccacgggga ccgctcccgc ggaaagaggt
301 tcagccagag cttccgagag gtggccggca ggttcctggc gtcggaggcc agcacacacc
361 tgctggtgtt cggcatggag cagcggctgc cgcccaacag cgagctggtg caggccgtgc
421 tgcggctctt ccaggagccg gtccccaagg ccgcgctgca caggcacggg cggctgtccc
481 cgcgcagcgc ccaggcccgg gtgaccgtcg agtggctgcg cgtccgcgac gacggctcca
541 accgcacctc cctcatcgac tccaggctgg tgtccgtcca cgagagcggc tggaaggcct
601 tcgacgtgac cgaggccgtg aacttctggc agcagctgag ccggccccgg cagccgctgc
661 tgctacaggt gtcggtgcag agggagcatc tgggcccgct ggcgtccggc gcccacaagc
721 tggtccgctt tgcctcgcag ggggcgccag ccgggcttgg ggagccccag ctggagctgc
781 acaccctgga cctcagggac tatggagctc agggcgactg tgaccctgaa gcaccaatga
841 ccgagggcac ccgctgctgc cgccaggaga tgtacattga cctgcagggg atgaagtggg
901 ccaagaactg ggtgctggag cccccgggct tcctggctta cgagtgtgtg ggcacctgcc
961 agcagccccc ggaggccctg gccttcaatt ggccatttct ggggccgcga cagtgtatcg
1021 cctcggagac tgcctcgctg cccatgatcg tcagcatcaa ggagggaggc aggaccaggc
1081 cccaggtggt cagcctgccc aacatgaggg tgcagaagtg cagctgtgcc tcggatgggg
1141 cgctcgtgcc aaggaggctc cagccatagg cgcctggtgt atccattgag ccctctaact
1201 gaacgtgtgc atagaggtgg tcttaatgta ggtcttaact ttatacttag caagttactc
1261 catcccaatt tagtgctcct gtgtgacctt cgccctgtgt ccttccattt cctgtctttc
1321 ccgtccatca cccatcctaa gcacttacgt gagtaaataa tgcagctcag atgctgagct
1381 ctagtaggaa atgctggcat gctgattaca agatacagct gagcaatgca cacattttca
1441 gctgggagtt tctgttctct ggcaaattct tcactgagtc tggaacaata ataccctatg
1501 attagaactg gggaaacaga actgaattgc tgtgttatat gaggaattaa aaccttcaaa
1561 tctctatttc ccccaaatac tgacccattc tggacttttg taaacatacc taggcccctg
1621 ttcccctgag agggtgctaa gaggaaggat gaagggcttc aggctggggg cagtggacag
1681 ggaattggga tacctggatt ctggttctga cagggccaca agctaggatc tctaacaaac
1741 gcagaaggct ttggctcgtc atttcctctt aaaaaggagg agctgggctt cagctctaag
1801 aacttcattg ccctggggat cagacagccc ctacctaccc ctgcccactc ctctggagac
1861 tgagccttgc ccgtgcatat ttaggtcatt tcccacactg tcttagagaa cttgtcacca
1921 gaaaccacat gtatttgcat gttttttgtt aatttagcta aagcaattga atgtagatac
1981 tcagaagaaa taaaaaatga tgtttcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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