LOCUS BC035665 2279 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens heat shock 70kDa protein 6 (HSP70B'), mRNA (cDNA clone
MGC:46216 IMAGE:5723718), complete cds.
ACCESSION BC035665
VERSION BC035665.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2279)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2279)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 79 Row: g Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42822885.
FEATURES Location/Qualifiers
source 1..2279
/db_xref="H-InvDB:HIT000051463"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:46216 IMAGE:5723718"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2279
/gene="HSPA6"
/db_xref="GeneID:3310"
/db_xref="HGNC:HGNC:5239"
/db_xref="MIM:140555"
CDS 110..2041
/gene="HSPA6"
/codon_start=1
/product="heat shock 70kDa protein 6 (HSP70B')"
/protein_id="AAH35665.1"
/db_xref="GeneID:3310"
/db_xref="HGNC:HGNC:5239"
/db_xref="MIM:140555"
/translation="MQAPRELAVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYV
AFTDTERLVGDAAKSQAALNPHNTVFDAKRLIGRKFADTTVQSDMKHWPFRVVSEGGK
PKVRVCYRGEDKTFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQAT
KDAGAIAGLNVLRIINEPTAAAIAYGLDRRGAGERNVLIFDLGGGTFDVSVLSIDAGV
FEVKATAGDTHLGGEDFDNRLVNHFMEEFRRKHGKDLSGNKRALRRLRTACERAKRTL
SSSTQATLEIDSLFEGVDFYTSITRARFEELCSDLFRSTLEPVEKALRDAKLDKAQIH
DVVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAVLMGDKCEKVQD
LLLLDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVFIQVYEGERA
MTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILSVTATDRSTGKANKITITND
KGRLSKEEVERMVHEAEQYKAEDEAQRDRVAAKNSLEAHVFHVKGSLQEESLRDKIPE
EDRRKMQDKCREVLAWLEHNQLAEKEEYEHQKRELEQICRPIFSRLYGGPGVPGGSSC
GTQARQGDPSTGPIIEEVD"
BASE COUNT 528 a 637 c 711 g 403 t
ORIGIN
1 cgggctggct gcagagaaac cgcagggaga gcctcactgc tgagcgcccc tcgacggcgg
61 agcggcagca gcctccgtgg cctccagcat ccgacaagaa gcttcagcca tgcaggcccc
121 acgggagctc gcggtgggca tcgacctggg caccacctac tcgtgcgtgg gcgtgtttca
181 gcagggccgc gtggagatcc tggccaacga ccagggcaac cgcaccacgc ccagctacgt
241 ggccttcacc gacaccgagc ggctggtcgg ggacgcggcc aagagccagg cggccctgaa
301 cccccacaac accgtgttcg atgccaagcg gctgatcggg cgcaagttcg cggacaccac
361 ggtgcagtcg gacatgaagc actggccctt ccgggtggtg agcgagggcg gcaagcccaa
421 ggtgcgcgta tgctaccgcg gggaggacaa gacgttctac cccgaggaga tctcgtccat
481 ggtgctgagc aagatgaagg agacggccga ggcgtacctg ggccagcccg tgaagcacgc
541 agtgatcacc gtgcccgcct atttcaatga ctcgcagcgc caggccacca aggacgcggg
601 ggccatcgcg gggctcaacg tgttgcggat catcaatgag cccacggcag ctgccatcgc
661 ctatgggctg gaccggcggg gcgcgggaga gcgcaacgtg ctcatttttg acctgggtgg
721 gggcaccttc gatgtgtcgg ttctctccat tgacgctggt gtctttgagg tgaaagccac
781 tgctggagat acccacctgg gaggagagga cttcgacaac cggctcgtga accacttcat
841 ggaagaattc cggcggaagc atgggaagga cctgagcggg aacaagcgtg ccctgcgcag
901 gctgcgcaca gcctgtgagc gcgccaagcg caccctgtcc tccagcaccc aggccaccct
961 ggagatagac tccctgttcg agggcgtgga cttctacacg tccatcactc gtgcccgctt
1021 tgaggaactg tgctcagacc tcttccgcag caccctggag ccggtggaga aggccctgcg
1081 ggatgccaag ctggacaagg cccagattca tgacgtcgtc ctggtggggg gctccactcg
1141 catccccaag gtgcagaagt tgctgcagga cttcttcaac ggcaaggagc tgaacaagag
1201 catcaaccct gatgaggctg tggcctatgg ggctgctgtg caggcggccg tgttgatggg
1261 ggacaaatgt gagaaagtgc aggatctcct gctgctggat gtggctcccc tgtctctggg
1321 gctggagaca gcaggtgggg tgatgaccac gctgatccag aggaacgcca ctatccccac
1381 caagcagacc cagactttca ccacctactc ggacaaccag cctggggtct tcatccaggt
1441 gtatgagggt gagagggcca tgaccaagga caacaacctg ctggggcgtt ttgaactcag
1501 tggcatccct cctgccccac gtggagtccc ccagatagag gtgacctttg acattgatgc
1561 taatggcatc ctgagcgtga cagccactga caggagcaca ggtaaggcta acaagatcac
1621 catcaccaat gacaagggcc ggctgagcaa ggaggaggtg gagaggatgg ttcatgaagc
1681 cgagcagtac aaggctgagg atgaggccca gagggacaga gtggctgcca aaaactcgct
1741 ggaggcccat gtcttccatg tgaaaggttc tttgcaagag gaaagcctta gggacaagat
1801 tcccgaagag gacaggcgca aaatgcaaga caagtgtcgg gaagtccttg cctggctgga
1861 gcacaaccag ctggcagaga aggaggagta tgagcatcag aagagggagc tggagcaaat
1921 ctgtcgcccc atcttctcca ggctctatgg ggggcctggt gtccctgggg gcagcagttg
1981 tggcactcaa gcccgccagg gggaccccag caccggcccc atcattgagg aggttgattg
2041 aatggccctt cgtgataagt cagctgtgac tgtcagggct atgctatggg ccttctagac
2101 tgtcttctat gatcctgccc ttcagagatg aactttccct ccaaagctag aactttcttc
2161 ccaggataac tgaagtcttt tgactttttg gggggagggc ggttcatcct cttctgcttc
2221 aaataaaaag tcattaattt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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