LOCUS BC035606 1820 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens fascin homolog 3, actin-bundling protein, testicular
(Strongylocentrotus purpuratus), mRNA (cDNA clone MGC:45033
IMAGE:5172588), complete cds.
ACCESSION BC035606
VERSION BC035606.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1820)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1820)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: j Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9966790.
FEATURES Location/Qualifiers
source 1..1820
/db_xref="H-InvDB:HIT000051436"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:45033 IMAGE:5172588"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1820
/gene="FSCN3"
/db_xref="GeneID:29999"
/db_xref="HGNC:HGNC:3961"
CDS 95..1591
/gene="FSCN3"
/codon_start=1
/product="fascin homolog 3, actin-bundling protein,
testicular (Strongylocentrotus purpuratus)"
/protein_id="AAH35606.1"
/db_xref="GeneID:29999"
/db_xref="HGNC:HGNC:3961"
/translation="MDETEWIHRHPKAEDLRVGLISWAGTYLTFEACKNTVTATAKSL
GRRQTWEILVSNEHETQAVVRLKSVQGLYLLCECDGTVCYGRPRTSHHGCFLLRFHRN
SKWTLQCLISGRYLESNGKDVFCTSHVLSAYHMWTPRPALHVHVILYSPIHRCYARAD
PTMGRIWVDAAVPCLEECGFLLHFRDGCYHLETSTHHFLSHVDRLFSQPSSQTAFHMQ
VRPGGLVALCDGEGGMLYPQGTHLLLGMGCNPMRGEEWFILQHCPTWVSLRSKTGRFI
SVIYDGEVRAASERLNRMSLFQFECDSESPTVQLRSANGYYLSQRRHRAVMADGHPLE
SDTFFRMHWNCGRIILQSCRGRFLGIAPNSLLMANVILPGPNEEFGILFANRSFLVLR
GRYGYVGSSSGHDLIQCNQDQPDRIHLLPCRPGIYHFQAQGGSFWSITSFGTFRPWGK
FALNFCIELQGSNLLTVLAPNGFYMRADQSGTLLADSEDITRECIWEF"
BASE COUNT 453 a 509 c 459 g 399 t
ORIGIN
1 ctacaggccc tattccaggc cctatggcct gtggaacctc accacggggg ggagggctgg
61 gccagacgga gacatcacct gtggtgtcag ccccatggat gagacagagt ggatacacag
121 acatcccaag gctgaggacc taagggttgg gctcatcagc tgggcaggaa cctacctcac
181 ctttgaggca tgcaagaata cagtcactgc aactgcgaag agtttgggca ggagacagac
241 ctgggagatc ttggtgagca atgagcatga gacacaggcc gtggtgcgac taaagagcgt
301 gcagggcctc tacctgctgt gtgagtgtga tggcaccgtg tgttatggcc gcccaaggac
361 cagccaccat gggtgctttc tactgcgttt ccaccggaac agcaagtgga ccctccagtg
421 cctaatctct ggtcgttatt tggagtccaa tggcaaggac gtgttttgca cttcccacgt
481 cctctcagct taccacatgt ggaccccccg accagccctc catgtccacg tgatcctcta
541 cagccccatc caccgctgct atgcccgggc tgaccccact atgggccgca tctgggtgga
601 cgcagcagtt ccctgcctgg aggagtgtgg cttcctgttg catttccgag atggatgcta
661 ccacctggag acctctacac accacttctt gtcccatgta gaccggctgt tctcccaacc
721 ctcatcacag acagcttttc acatgcaagt gcggcctgga gggcttgtgg cactgtgtga
781 tggagaagga ggcatgttat atccacaggg cacgcatctg ctcttgggca tgggctgcaa
841 ccccatgagg ggtgaggagt ggttcatcct acagcactgc ccaacctggg tcagcctcag
901 gtcaaagact gggcggttca tctcagtcat ctacgatggt gaggtgcgtg ctgcttctga
961 gcgcttaaac cgaatgtcct tgttccagtt tgaatgtgac agtgagagcc ccactgtgca
1021 gcttcgttca gccaatggct actacctatc ccagaggcgc cacagggcag taatggctga
1081 tgggcacccc ctggagtctg acacgttctt ccgaatgcac tggaactgtg gcaggatcat
1141 cctgcagtcc tgcagggggc gcttcctggg cattgcaccc aacagcctgc tgatggccaa
1201 tgtcatcctt ccaggcccaa atgaggaatt tgggatttta tttgccaatc gctccttcct
1261 tgtattgcga ggtcgttatg gctatgtggg ctcctcatcg ggccatgacc tcatacagtg
1321 caaccaggat cagcccgacc gcattcatct actaccctgc cgaccgggta tctaccactt
1381 ccaggcacag gggggatcct tctggtcaat aacatccttt ggcacctttc gcccttgggg
1441 caagtttgcc ctcaacttct gtatcgagct tcaggggagc aacttactca ctgtactggc
1501 ccccaatggc ttctacatgc gagccgacca aagtggcacc ctgttggcag acagtgaaga
1561 cattaccaga gagtgtatct gggaatttta ggtcaatggg atgtcaccta ccaaaatcca
1621 aatcctccag gaaaaactac tacactaaat ggaccaggaa cctcagagtc aagatccaag
1681 agaagaacat ctgttacaac ttttcctacc cagtttagca aaacacctgt tttatgcaac
1741 aatacatcac aacaggccac ccccaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa
//