LOCUS BC035599 4010 bp mRNA linear HUM 25-OCT-2007
DEFINITION Homo sapiens C2 calcium-dependent domain containing 3, mRNA (cDNA
clone IMAGE:3871970), partial cds.
ACCESSION BC035599
VERSION BC035599.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4010)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4010)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 68 Row: c Column: 2.
FEATURES Location/Qualifiers
source 1..4010
/db_xref="H-InvDB:HIT000093976"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3871970"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..4010
/gene="C2CD3"
/gene_synonym="DKFZP586P0123"
/db_xref="GeneID:26005"
/db_xref="HGNC:HGNC:24564"
CDS <1..2044
/gene="C2CD3"
/gene_synonym="DKFZP586P0123"
/codon_start=2
/product="C2CD3 protein"
/protein_id="AAH35599.1"
/db_xref="GeneID:26005"
/db_xref="HGNC:HGNC:24564"
/translation="HASGEQRRTHPVACSFCPEFSHHVEFTCNLVTQHCSGEACFLAE
LLEFAEVIFAVYHENTKSASDIISIESCKEYLLGVVKVPTKELLIKRSGITGWYPIIL
PEDGGLPHGLELMQKIVGGLELSISFTHRGDRERVLEAAEHLGWSFENSLKDFVRMDE
GEPATVTISTPRLWLPIHCVLLAGHNHIHKNTYCYLRYKFYDHEAFWTPLKKPKESVN
KKQIMVTFKASKRAEVTRGPSLLWYFREERLEIQVWRAYGNDSVERPHQTDSWIGSAY
VDLARLGERSARTLTVSGVYPLFGRNASNLSGAALRVHVVLSSLSSHLEPTHELDSMD
CSSHSESEQLPRRNDEVQLSPPEVISCHQKSPASTQVPCSSTTAEVRLTQEGPADLDG
TFAVSILVERAMHLSLKGSPLTERKVSIPSCCVSFATADESSPVYTQVVENTDSPIWN
FQQQSRLSKELLLDPQQTLVFKVWHKGDEERVIGFASVDLSPLLSGFQFVCGWYNITD
FSGECQGQIKVAVSPLESLIHFKEERQARRGVETSKSLIPIYSPFSFPASDTYAAFSS
HMARQTLDQLAHASSKELDFSSPGRSDTTRSQASRHEEHVQNIRRFHESLHLQGEAPL
PCDDKLTTSPLSSQTSILTSLRSSPSLSYPSALRLKRPSHSTRRAVGTILGQVPAA"
BASE COUNT 1066 a 1070 c 972 g 902 t
ORIGIN
1 ccacgcgtcc ggagaacagc gccgaaccca ccctgtggcc tgttctttct gccctgagtt
61 ctcccatcac gttgagttca catgtaactt ggtgactcag cactgtagtg gagaggcctg
121 tttcctagca gagttgttgg agtttgcaga agttattttt gctgtctatc atgaaaatac
181 caagtcagca agtgatataa tcagtattga gtcatgcaaa gagtatctgc ttggagtagt
241 aaaagttcca acaaaagagc tgctgatcaa gagatctggg atcacaggat ggtatcctat
301 cattttacca gaagacgggg gcctacctca tggcctggag ctcatgcaga agatcgtggg
361 tggtctggag ctttcgattt ccttcacgca tcgtggagat agagaacggg tgttggaagc
421 tgctgagcat ttgggctgga gctttgagaa cagcctgaaa gattttgtca gaatggatga
481 aggggagcca gccactgtca ccatctccac cccaaggctg tggctgccca tccattgtgt
541 gctgcttgct ggccacaacc acattcataa gaatacatat tgctaccttc gctacaagtt
601 ctatgatcat gaagcctttt ggacccctct caagaagcct aaggaatctg taaacaaaaa
661 gcagattatg gtcactttca aggcatccaa aagagcagaa gtcaccaggg gcccatcact
721 gctttggtac ttcagggagg agaggctaga gatccaagtg tggcgagctt atggcaatga
781 cagtgtggag agaccccatc agacagacag ctggattggc tcagcctatg tggacctggc
841 cagacttggg gagaggtcag cgaggacgct aactgtcagt ggtgtgtatc ctctgtttgg
901 acgaaatgct tccaacctct caggagctgc cttgcgagtt catgtggttc tttcctctct
961 ttcctcacac cttgagccca ctcatgagct ggactccatg gactgcagca gccacagtga
1021 gtctgagcag ctccccagaa ggaatgatga ggtccagctc tctccaccag aagtcatctc
1081 ctgccaccag aagtctcctg cctccaccca ggtcccctgc agcagcacca cagctgaagt
1141 ccgcctgacg caggagggcc ctgctgattt ggatggaacg tttgcagtca gcatcctagt
1201 ggaaagagca atgcacttga gcttgaaagg gagccccttg acagagcgga aagtatcgat
1261 acccagttgt tgtgtatcct ttgcaacagc cgatgagtca tctcctgtat acacccaagt
1321 ggttgaaaac acagattccc ccatctggaa ttttcaacag cagtcaaggc tatcaaaaga
1381 gctgcttctg gacccacaac aaaccctggt cttcaaagtt tggcataaag gagatgagga
1441 gagggtgatt ggctttgcct cggtggacct ctccccactt ctctctggct tccagtttgt
1501 ctgtggctgg tacaacatca cagacttcag tggagagtgc caggggcaga taaaagttgc
1561 tgtctcccct ttggagagtt tgatacactt caaagaagaa aggcaagcaa ggcgtggagt
1621 ggagacctca aaatcactga tcccaatata cagtcccttt tccttccctg cctctgatac
1681 gtatgctgca ttctccagcc acatggcaag gcagacccta gaccaacttg ctcatgcctc
1741 ctcaaaggag cttgatttct cctctcctgg gagaagtgat accacaagaa gccaagcatc
1801 acgccatgaa gagcatgtgc agaacattcg ccggtttcat gaatccctgc atcttcaggg
1861 agaggcaccc ttgccatgtg atgacaaact gaccacatca cctttgtcct cccaaacctc
1921 cattctgact tctctcagaa gctcaccaag cctttcctac ccctcagccc tcagactcaa
1981 acggccatct cacagcacca ggagagctgt agggaccatc ttgggccagg tgccagcagc
2041 ctagaccctg ggagccagtg tatcctggag aaatccagta acctggtgtt gcaagtcagc
2101 tccttaatca cagatctgca gactatcacc agggattcgc aagcagcttt gagttctcac
2161 cgagccagga gtagaagcaa caaggccacc accctcccag atgctcagga cacagaagca
2221 ctgcaagaac gatgcacaat gccagatgag ccattggtaa gagctccaga taaaggcaca
2281 gattccccat caccccctcc tctcgaagag acttcaaatg gaggaagaat gctccatgag
2341 tccctgaggc atgcagtacc cattacaagg atgcagagca gtgaagacac tgaggcaggc
2401 ccagcctaca gtgatgagga ctatgaagaa gacatcattg agcccaggac cttaaatgag
2461 atcaccacgg tgacagacaa aactagccct tggtctagtg tcatatcaga cacaagtgag
2521 gtcatcagcc ctcagcctga cgaggtgcag agggaaggcc cctcttgtcc ttctccaggg
2581 cctttctgca gagaggagct tatggtcaaa agtagctttc tctccagccc agaaagggct
2641 gtcaaccccc acctgcctag gcagggttct cctagccaaa gtcttgttgc ttgtgagtgt
2701 gaggcctcta aggccagggt tggtggcgag tctgcctcag ccaaccctca gcccatccca
2761 tgcccaacac tctcaggagc tcaacagagc agcacgtttg ttggatggag ctcaccacag
2821 acagatcaga acaaggagcc caagtcagag gccccagctg agaatgaagc tgccaccagt
2881 gagctcggtg actctgctga tagcttcaag aagttgccgc taaatctagc ctcccagagc
2941 agaagggaaa accataaggg accacccatc gactcctctg acatcaggca gaggcaggtg
3001 acaactggat cagagacgtc cacaaagcag agcctcctgc tcccagggcc cattgtggtg
3061 cccaacttct ttttgcctcc ccagcagttg gaggcttccc tgcggatgct ttcactctca
3121 gcaactttgc caccagcagc cacaacagat caggacaaga gcgaagccac caggggagct
3181 ctctcccaaa ggccttgtcg ccccagacct aactcgctcc ccctcaacct gcctgaggaa
3241 gaaactctca ggattgcacg gatattttct tctcagtact cccagaaaga ctgacgcagc
3301 ctgaggggct ggggggaagg agacacctgc ccaccctccg tcagctttgt ccagcttgca
3361 ggaggcacca ggtctggctc cttcagggct gtcacagtcc tgaaaccacc acttgcctag
3421 gccacggatg cctcaagaga cccggtcagc ccagactgga ggagtgcccc aaaccagtcc
3481 agtgtccact tgccagaatt tcagctcctt ttttctgtgg tgaggcaaag gctagaaata
3541 aaatggaatc cgcgcccaag tgggacccaa gcaggcatct ttcggtggag aaacgccccc
3601 cagtgtcctt gacacagctg actgctggca tgagcccacc ctctgcctga agatgcagga
3661 ccatttttgc cttaaaagtt ggggaggagg gacatgtaga ttgtgtgcat tgtgcatagt
3721 caaggaaatc ctagggccac ctccagttca tttgtgtggg aacaaggata ttttatagat
3781 acaaattatt tttatgctgt gttgaattaa tcaattagga gaggaagggg aaatcacttc
3841 cttcaaactt tttatctgat tgtctaaaat tctaaccatg cttttaactt attattttta
3901 cccagctctg aaggtcattg ttcttgcctg tgtttgaata aaatcatatt ggtgtttgta
3961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//