LOCUS BC035582 2910 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens tripartite motif-containing 22, mRNA (cDNA clone
MGC:44863 IMAGE:5583800), complete cds.
ACCESSION BC035582
VERSION BC035582.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2910)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2910)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 69 Row: p Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 15208661.
FEATURES Location/Qualifiers
source 1..2910
/db_xref="H-InvDB:HIT000051424"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:44863 IMAGE:5583800"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2910
/gene="TRIM22"
/gene_synonym="GPSTAF50"
/gene_synonym="RNF94"
/gene_synonym="STAF50"
/db_xref="GeneID:10346"
/db_xref="HGNC:HGNC:16379"
/db_xref="MIM:606559"
CDS 153..1649
/gene="TRIM22"
/gene_synonym="GPSTAF50"
/gene_synonym="RNF94"
/gene_synonym="STAF50"
/codon_start=1
/product="tripartite motif-containing 22"
/protein_id="AAH35582.1"
/db_xref="GeneID:10346"
/db_xref="HGNC:HGNC:16379"
/db_xref="MIM:606559"
/translation="MDFSVKVDIEKEVTCPICLELLTEPLSLDCGHSFCQACITAKIK
ESVIISRGESSCPVCQTRFQPGNLRPNRHLANIVERVKEVKMSPQEGQKRDVCEHHGK
KLQIFCKEDGKVICWVCELSQEHQGHQTFRINEVVKECQEKLQVALQRLIKEDQEAEK
LEDDIRQERTAWKNYIQIERQKILKGFNEMRVILDNEEQRELQKLEEGEVNVLDNLAA
ATDQLVQQRQDASTLISDLQRRLRGSSVEMLQDVIDVMKRSESWTLKKPKSVSKKLKS
VFRVPDLSGMLQVLKELTDVQYYWVDVMLNPGSATSNVAISVDQRQVKTVRTCTFKNS
NPCDFSAFGVFGCQYFSSGKYYWEVDVSGKIAWILGVHSKISSLNKRKSSGFAFDPSV
NYSKVYSRYRPQYGYWVIGLQNTCEYNAFEDSSSSDPKVLTLFMAVPPCRIGVFLDYE
AGIVSFFNVTNHGALIYKFSGCRFSRPAYPYFNPWNCLVPMTVCPPSS"
BASE COUNT 855 a 594 c 608 g 853 t
ORIGIN
1 ccacgcgtcc gatctggttt acaccggctc ctgccctgcc ttcactcttc tcccctgatt
61 caagactcct ctgctttgga ctgaagcact gcaggagttt gtgaccaaga acttcaagag
121 tcaagacaga aggaagccaa gggagcagtg caatggattt ctcagtaaag gtagacatag
181 agaaggaggt gacctgcccc atctgcctgg agctcctgac agaacctctg agcctagatt
241 gtggccacag cttctgccaa gcctgcatca ctgcaaagat caaggagtca gtgatcatct
301 caagagggga aagcagctgt cctgtgtgtc agaccagatt ccagcctggg aacctccgac
361 ctaatcggca tctggccaac atagttgaga gagtcaaaga ggtcaagatg agcccacagg
421 aggggcagaa gagagatgtc tgtgagcacc atggaaaaaa actccagatc ttctgtaagg
481 aggatggaaa agtcatttgc tgggtttgtg aactgtctca ggaacaccaa ggtcaccaaa
541 cattccgcat aaacgaggtg gtcaaggaat gtcaggaaaa gctgcaggta gccctgcaga
601 ggctgataaa ggaggatcaa gaggctgaga agctggaaga tgacatcaga caagagagaa
661 ccgcctggaa gaattatatc cagatcgaga gacagaagat tctgaaaggg ttcaatgaaa
721 tgagagtcat cttggacaat gaggagcaga gagagctgca aaagctggag gaaggtgagg
781 tgaatgtgct ggacaacctg gcagcagcta cagaccagct ggtccagcag aggcaggatg
841 ccagcacgct catctcagat ctccagcgga ggttgagggg atcgtcagta gagatgctgc
901 aggatgtgat tgacgtcatg aaaaggagtg aaagctggac attgaagaag ccaaaatctg
961 tttccaagaa actaaagagt gtattccgag taccagatct gagtgggatg ctgcaagttc
1021 ttaaagagct gacagatgtc cagtactact gggtggacgt gatgctgaat ccaggcagtg
1081 ccacttcgaa tgttgctatt tctgtggatc agagacaagt gaaaactgta cgcacctgca
1141 catttaagaa ttcaaatcca tgtgattttt ctgcttttgg tgtcttcggc tgccaatatt
1201 tctcttcggg gaaatattac tgggaagtag atgtgtctgg aaagattgcc tggatcctgg
1261 gcgtacacag taaaataagt agtctgaata aaaggaagag ctctgggttt gcttttgatc
1321 caagtgtaaa ttattcaaaa gtttactcca gatatagacc tcaatatggc tactgggtta
1381 taggattaca gaatacatgt gaatataatg cttttgagga ctcctcctct tctgatccca
1441 aggttttgac tctctttatg gctgtgcctc cctgtcgtat tggggttttc ctagactatg
1501 aggcaggcat tgtctcattt ttcaatgtca caaaccacgg agcactcatc tacaagttct
1561 ctggatgtcg cttttctcga cctgcttatc cgtatttcaa tccttggaac tgcctagtcc
1621 ccatgactgt gtgcccaccg agctcctgag tgttctcatt cctttaccca cttctgcata
1681 gtagcccttg tgctgagact cagattctgc acctgagttc atctctactg agaccatctc
1741 ttcctttctt tccccttctt ttacttagaa tgtctttgta ttcatttgct agggcttcca
1801 tagcaaagca tcatagattg ctgatttaaa ctgtaattgt attgccgtac tgtgggctgg
1861 aaatcccaaa tctagattcc agcagagttg gttctttctg aggtctgcaa ggaagggctc
1921 tgttccatgc ctctctcctt ggcttgtaga aggcatcttg tccctatgac tcttcacatt
1981 gtctttatgt acatctctgt gcccaagttt tcccttttta ttaagacacc agtcatactg
2041 gctcagggcc caccgctaat gccttaatga aatcatttta acattatatt ctctacaaag
2101 accttatttc caaataagat aatatttgga ggtattggga ataaaaactc caacatataa
2161 atttgaggaa ggcacgattt cactcataac aatcttaccc tttcttgcaa gagatgcttg
2221 tacattattt tcctaatacc ttggtttcac tagtagtaaa cattattttt tttttatatt
2281 tgcaaaggaa acatatctaa tccttcctat agaaagaaca gtattgctgt aattcctttt
2341 cttttcttcc tcatttcctc tgccccttaa aagattgaag aaagagaaac ttgtcaactc
2401 atatccacgt tatctagcaa agtacataag aatctatcac taagtaatgt atccttcaga
2461 atgtgttggt ttaccagtga caccccatat tcatcacaaa attaaagcaa gaagtccata
2521 gtaatttatt tgctaatagt ggatttttaa tgctcagagt ttctgaggtc aaattttatc
2581 ttttcactta caagctctat gatcttaaat aatttactta atgtattttg gtgtattttc
2641 ctcaaattaa tattggtgtt caagactata tctaattcct ctgatcactt tgagaaacaa
2701 acttttatta aatgtaaggc acttttctat gaattttaaa tataaaaata aatattgttc
2761 tgattattac tgaaaagatg tcagccattt caatgtcttg ggaaacaatt ttttgttttt
2821 gttctgtttt ctttttgctt caataaaaca atagctggct ctaaaaaaaa aaaaaaaaaa
2881 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//