LOCUS BC035499 1952 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chaperonin containing TCP1, subunit 5 (epsilon), mRNA
(cDNA clone MGC:20797 IMAGE:4329194), complete cds.
ACCESSION BC035499
VERSION BC035499.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1952)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1952)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC035499.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: c Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 58331232.
FEATURES Location/Qualifiers
source 1..1952
/db_xref="H-InvDB:HIT000051399"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20797 IMAGE:4329194"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1952
/gene="CCT5"
/gene_synonym="CCT-epsilon"
/gene_synonym="CCTE"
/gene_synonym="KIAA0098"
/gene_synonym="TCP-1-epsilon"
/db_xref="GeneID:22948"
/db_xref="HGNC:HGNC:1618"
/db_xref="MIM:610150"
CDS 83..1708
/gene="CCT5"
/gene_synonym="CCT-epsilon"
/gene_synonym="CCTE"
/gene_synonym="KIAA0098"
/gene_synonym="TCP-1-epsilon"
/codon_start=1
/product="chaperonin containing TCP1, subunit 5 (epsilon)"
/protein_id="AAH35499.1"
/db_xref="GeneID:22948"
/db_xref="HGNC:HGNC:1618"
/db_xref="MIM:610150"
/translation="MASMGTLAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAV
ANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEI
GDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIK
DTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGR
LEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKA
LQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIA
IATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNK
MIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRA
FADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIE
TLIGKKQQISLATQMVRMILKIDDIRKPGESEE"
BASE COUNT 579 a 402 c 503 g 468 t
ORIGIN
1 gccctcccga gaaagggaag tgcattctcg cttccgtagc ggtctccgcc ggttggggga
61 aagtaattcc ggctgttgca ccatggcgtc catggggacc ctcgccttcg atgaatatgg
121 gcgccctttc ctcatcatca aggatcagga ccgcaagtcc cgtcttatgg gacttgaggc
181 cctcaagtct catataatgg cagcaaaggc tgtagcaaat acaatgagaa catcacttgg
241 accaaatggg cttgataaga tgatggtgga taaggatggg gatgtgactg taactaatga
301 tggggccacc atcttaagca tgatggatgt tgatcatcag attgccaagc tgatggtgga
361 actgtccaag tctcaggatg atgaaattgg agatggaacc acaggagtgg ttgtcctggc
421 tggtgccttg ttagaagaag cggagcaatt gctagaccga ggcattcacc caatcagaat
481 agccgatggc tatgagcagg ctgctcgcgt tgctattgaa cacctggaca agatcagcga
541 tagcgtcctt gttgacataa aggacaccga acccctgatt cagacagcaa aaaccacgct
601 gggctccaaa gtggtcaaca gttgtcaccg acagatggct gagattgctg tgaatgccgt
661 cctcactgta gcagatatgg agcggagaga cgttgacttt gagcttatca aagtagaagg
721 caaagtgggc ggcaggctgg aggacactaa actgattaag ggcgtgattg tggacaagga
781 tttcagtcac ccacagatgc caaaaaaagt ggaagatgcg aagattgcaa ttctcacatg
841 tccatttgaa ccacccaaac caaaaacaaa gcataagctg gatgtgacct ctgtcgaaga
901 ttataaagcc cttcagaaat acgaaaagga gaaatttgaa gagatgattc aacaaattaa
961 agagactggt gctaacctag caatttgtca gtggggcttt gatgatgaag caaatcactt
1021 acttcttcag aacaacttgc ctgcggttcg ctgggtagga ggacctgaaa ttgagctgat
1081 tgccatcgca acaggagggc ggatcgtccc caggttctca gagctcacag ccgagaagct
1141 gggctttgct ggtcttgtac aggagatctc atttgggaca actaaggata aaatgctggt
1201 catcgagcag tgtaagaact ccagagctgt aaccattttt attagaggag gaaataagat
1261 gatcattgag gaggcgaaac gatcccttca cgatgctttg tgtgtcatcc ggaacctcat
1321 ccgcgataat cgtgtggtgt atggaggagg ggctgctgag atatcctgtg ccctggcagt
1381 tagccaagag gcggataagt gccccacctt agaacagtat gccatgagag cgtttgccga
1441 cgcactggag gtcatcccca tggccctctc tgaaaacagt ggcatgaatc ccatccagac
1501 tatgaccgaa gtccgagcca gacaggtgaa ggagatgaac cctgctcttg gcatcgactg
1561 tttgcacaag gggacaaatg atatgaagca acagcatgtc atagaaacct tgattggcaa
1621 aaagcaacag atatctcttg caacacaaat ggttagaatg attttgaaga ttgatgacat
1681 tcgtaagcct ggagaatctg aagaatgaag acattgagaa aactatgtag caagatccac
1741 ttctgtgatt aagtaaatgg atgtctcgtg atgcgtctac agttatttat tgttacatcc
1801 ttttccagac actgtagatg ctataataaa aatagctgtt tggtaaccat agtttcactt
1861 gttcaaagct gtgtaatcgt gggggtacta tctcaactgc ttttgtattc attgtattaa
1921 aagaatctgt ttaaaaaaaa aaaaaaaaaa aa
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