LOCUS BC035351 2001 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens aldo-keto reductase family 7-like, mRNA (cDNA clone
IMAGE:5190563), complete cds.
ACCESSION BC035351
VERSION BC035351.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2001)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2001)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 50 Row: j Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41152111
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2001
/db_xref="H-InvDB:HIT000093841"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5190563"
/tissue_type="Colon, Kidney, Stomach, adult, whole pooled"
/clone_lib="NIH_MGC_116"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2001
/gene="AKR7L"
/gene_synonym="AFAR3"
/gene_synonym="AKR7A4"
/db_xref="GeneID:246181"
/db_xref="HGNC:HGNC:24056"
/db_xref="MIM:608478"
CDS 205..666
/gene="AKR7L"
/gene_synonym="AFAR3"
/gene_synonym="AKR7A4"
/codon_start=1
/product="aldo-keto reductase family 7-like"
/protein_id="AAH35351.1"
/db_xref="GeneID:246181"
/db_xref="HGNC:HGNC:24056"
/db_xref="MIM:608478"
/translation="MHLTTAPRWKRHCVPATSCTRRASSWSLASPTMPPGKWPRSVPS
ARATAGSCPLCTSFWKEHHFEGIALVEKALQAAYGASAPSMTSAALRWMYHHSQLQGA
HGDAVILGMSSLEQLEQNLAAAEEGPLEPAVVDAFNQAWHLFAHECPNYFI"
BASE COUNT 586 a 456 c 515 g 444 t
ORIGIN
1 cggccttcct gtacagcgac ggccagtccg agaccatcct tggcggcctg gggctccgaa
61 tgggcagcag cgactgcaga gtgaaaattg ctaccaaggc caatccatgg attgggaact
121 ccctgaagcc tgacagtgtc cgatcccagc tggagacgtc actgaagcgg ctgcagtgtc
181 cctgagtgga cctcttctat ctacatgcac ctgaccacag cgccccggtg gaagagacac
241 tgcgtgcctg ccaccagctg caccaggagg gcaagttcgt ggagcttggc ctctccaact
301 atgccgcctg ggaagtggcc gagatctgta ccctctgcaa gagcaacggc tggatcctgc
361 ccactgtgta ccagcttctg gaaggagcac cacttcgagg gcattgccct ggtggagaag
421 gccctgcagg ccgcgtatgg cgccagcgct cccagcatga cctcggccgc cctccggtgg
481 atgtaccacc actcacagct gcagggtgcc cacggggacg cggtcatcct gggcatgtcc
541 agcctggagc agctggagca gaacttggca gcggcagagg aagggcccct ggagccggct
601 gtcgtggacg cctttaatca agcctggcat ttgtttgccc acgaatgtcc caactacttc
661 atctaagctc attgtggctc aggctgccca aggcttttct gtcaactctt ttgctctctc
721 ccgctttgtc taatttagaa ctgcctcact aaattcttag ggatggaagt atttggaaaa
781 aaacctaaca gtagagtcac cacctaagga agaataaaat ctcccagggt gctgtgtgtt
841 agtctgtttg cgttgctata aaagaatacc tgagactggg tcatgtataa agaaaagagg
901 tttctttggc tcacagttct gcagtctgta caagagggtg tggtgccggc atctgctctt
961 ggtgagggcc tcaggaagct tagaatcatg gcagaagggg aaacggagcc agcgtgtcac
1021 atggtgagag agggagcaag agacagacag gggaggaaat tcacacactg atggtgggga
1081 tgtaaaatgg tacaaccagt ttggaaaaca gtttggcagt ttctcaaagg attaaacata
1141 aaattaccat aggattcagc agttccactt gtgggtatgt agccaagaga aatgaaaaca
1201 tatctcccca caaaaaaact tgggtatgag atttcacatt atcattgctc ataatagcca
1261 ataagtaaaa acaacccaaa tgtccaagaa tgaataaatg gataaacaaa atatggtata
1321 tttatacaac agactattat tcggccatta aaaaaaaaaa gagtggctga cacctgtaat
1381 ctcagcactt tgagaggcca aggcagtagg actgattgaa gacaggagtt ccagaccagt
1441 ctgggaaaca aagcgagacc ctgtctccac taaacataaa aacaaaatta ctggggcccc
1501 atggcacaca cctgtagtcc cagctgctcg ggaagctgag atgggcggat tgcttgagcc
1561 caggtattca agtctggagt gagctatgac tgtgccactg cactccagcc tgggcgacag
1621 agcaaaccct gtttccaaac aaacaaacaa acaaacaaat acacagacag aagtagttaa
1681 acatctacaa ggtaagtgca tcttgaagac gtgttaagtt aaagaagcca attacaaaag
1741 gtttcacgtt gtatgatttc gtttatatga aatgtccaga ataggcaaat ctgtttgaga
1801 gagagaaagt agatgagtac ttgcctagga ctgggaggag gattgcgagg aaatggagat
1861 tcactgctaa tgagtacagg gtttcttttg ggggcgctta tgaagatgct ctgaaattga
1921 ttgtgatggt tgtacaactc tgaatacatg aaacagcatt aaacatcact ttaagtaagt
1981 caaaaaaaaa aaaaaaaaaa a
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