LOCUS BC035234 2010 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ankyrin repeat domain 53, mRNA (cDNA clone MGC:35073
IMAGE:5166484), complete cds.
ACCESSION BC035234
VERSION BC035234.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2010)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2010)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: n Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 46358069.
FEATURES Location/Qualifiers
source 1..2010
/db_xref="H-InvDB:HIT000051353"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35073 IMAGE:5166484"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2010
/gene="ANKRD53"
/gene_synonym="FLJ12056"
/gene_synonym="FLJ36160"
/db_xref="GeneID:79998"
/db_xref="HGNC:HGNC:25691"
CDS 202..1233
/gene="ANKRD53"
/gene_synonym="FLJ12056"
/gene_synonym="FLJ36160"
/codon_start=1
/product="ankyrin repeat domain 53"
/protein_id="AAH35234.1"
/db_xref="GeneID:79998"
/db_xref="HGNC:HGNC:25691"
/translation="MASAGSTARRAGSGSWHSERGEGRGARPQPTPSGSMQQANKVSL
KATWTDAESKQPSQPLPDLADHLSAQATALARPRRPASLTPPRADPSPSKESDQTAID
QTAIGSYYQLFAAAVGNVEWLRFCLNQSLREIPTDDKGFTAIHFAAQWGKIACLQVLV
EEYKFPVDLLTNNSQTPLHLVIHRDNTTVALPCIYYLLEKGADLNAQTCNGSTPLHLA
ARDGLLDCVKVLVQSGANVHAQDAMGYKPIDFCKIWNHRACARFLKDAMWKKDKKDFA
REMTKMKMFKSQLTLMEHNYLIEYQGQGCSVHFPFAFSPITPETLLWQDISLLSDCGF
LWRRRELSF"
BASE COUNT 475 a 661 c 557 g 317 t
ORIGIN
1 cggcgggtgg ggagcggcag gcgggcaggg tccccggagg cccccgggct ctgcccctcc
61 agctagagag gcagccgaac cctagcggcc tggaaggggc cgggaaaccg cggccagctg
121 gcaaggagtg gcccccgggg gcggggcgcc ggcgggtgtg tgagtagccc gcccggcccg
181 ggtccgagtt ccagccccgc gatggcctcc gcgggcagca ccgctcggcg ggcgggctcc
241 ggaagctggc actcagaaag gggagaaggg agaggtgctc ggccgcagcc aactccaagt
301 ggctccatgc agcaggcgaa caaagtctcc ttgaaggcca cctggactga cgcggagtcc
361 aagcagccca gccagcccct gcccgacctc gcagaccacc tcagtgcgca ggcgactgcc
421 ctcgccaggc cgcgccgccc tgcctcgctc accccgcccc gcgctgaccc cagccccagc
481 aaggagtccg accagacggc aatcgaccag acggcgatcg ggagctacta ccagctgttc
541 gcagcggctg tgggcaacgt ggaatggctg cgattctgtc tgaaccagag cctcagggaa
601 atccccaccg acgacaaggg cttcactgcc atccacttcg ccgcccaatg gggcaagatt
661 gcatgcctgc aggtcctggt agaggagtac aagtttcccg tggacctgct gaccaacaat
721 agccagacac ccctgcacct cgtcatccac agggacaaca ccaccgtggc cctcccctgc
781 atctactacc tgctggagaa aggcgcagac ctcaatgctc agacatgcaa cggctccacg
841 cccctgcacc tggcagcccg tgacggcttg ctggactgtg tgaaggtcct ggtgcagagt
901 ggcgccaacg tccatgccca agatgccatg ggctacaaac ccattgactt ctgcaaaata
961 tggaaccacc gtgcctgtgc ccggttcttg aaggatgcca tgtggaaaaa ggacaagaag
1021 gactttgccc gtgagatgac gaaaatgaag atgttcaaga gccagctgac cctcatggag
1081 cacaactacc tgattgagta tcaaggtcaa ggatgcagtg tgcacttccc atttgccttt
1141 tcccccatca caccagagac tctcctatgg caggacattt ctctactatc agactgtgga
1201 ttcctttgga gaagaaggga attgtctttc taaagagcac aaaattctca gagaagctgc
1261 tatcagaaag tggctccacg gcaagctgca cccaggccac tctctggtct ccaataccaa
1321 gcaagcccgg gccaccgccc tctccaagac cccagagcaa cgggaatcgc agcgttccag
1381 gagcttccac ccctctgtgg atgcacgcct gcaatgcatt ccacagccca cggagatgcc
1441 caagcccatc tacaggaagc ccacggtcaa gcggcccgcg atgtggaatg ttagcaacaa
1501 ccccgccaga ccccccacca cccagatcag ccactcgcag ggcatccgcc tgggcgtgca
1561 tccagacccc actccggagc acgacttcag cagcttcctg gaggtgaggc ctgatgggca
1621 cggcggtgcg cggctgcaca cagtggacgg ccactgggtg gcgcccgtgc cgcggctgcc
1681 ttttgaggtg ctgctgcgca tgctgtaccc acgtgtatgg ccatacagaa tgaaggtgcc
1741 ccagggcttt taccccatca gcatgaggga agtgcccagg aagcggcacc tgggtgacaa
1801 caccttctgg accgacactc tggccatgaa cctgcgtgac acattcgatg aagccttcct
1861 ggcagctgtg cgatctcatc aaggactccc caccctgccc tccccacaaa ccaacccata
1921 aatttattat ggctacctct ccccctgagg cagcccagtg aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//