LOCUS BC035040 3793 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens GRAM domain containing 1C, mRNA (cDNA clone MGC:34039
IMAGE:4829130), complete cds.
ACCESSION BC035040
VERSION BC035040.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3793)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3793)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: c Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 63055050.
FEATURES Location/Qualifiers
source 1..3793
/db_xref="H-InvDB:HIT000051315"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34039 IMAGE:4829130"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3793
/gene="GRAMD1C"
/gene_synonym="DKFZp434C0328"
/db_xref="GeneID:54762"
/db_xref="HGNC:HGNC:25252"
CDS 83..2071
/gene="GRAMD1C"
/gene_synonym="DKFZp434C0328"
/codon_start=1
/product="GRAM domain containing 1C"
/protein_id="AAH35040.1"
/db_xref="GeneID:54762"
/db_xref="HGNC:HGNC:25252"
/translation="MEGAPTVRQVMNEGDSSLATDLQEDVEENPSPTVEENNVVVKKQ
GPNLHNWSGDWSFWISSSTYKDRNEEYRRQFTHLPDTERLIADYACALQRDILLQGRL
YLSENWLCFYSNIFRWETTISIALKNITFMTKEKTARLIPNAIQIVTESEKFFFTSFG
ARDRSYLSIFRLWQNVLLDKSLTRQEFWQLLQQNYGTELGLNAEEMENLSLSIEDVQP
RSPGRSSLDDSGERDEKLSKSISFTSESISRVSETESFDGNSSKGGLGKEESQNEKQT
KKSLLPTLEKKLTRVPSKSLDLNKNEYLSLDKSSTSDSVDEENVPEKDLHGRLFINRI
FHISADRMFELLFTSSRFMQKFASSRNIIDVVSTPWTAELGGDQLRTMTYTIVLNSPL
TGKCTAATEKQTLYKESREARFYLVDSEVLTHDVPYHDYFYTVNRYCIIRSSKQKCRL
RVSTDLKYRKQPWGLVKSLIEKNSWSSLEDYFKQLESDLLIEESVLNQAIEDPGKLTG
LRRRRRTFNRTAETVPKLSSQHSSGDVGLGAKGDITGKKKEMENYNVTLIVVMSIFVL
LLVLLNVTLFLKLSKIEHAAQSFYRLRLQEEKSLNLASDMVSRAETIQKNKDQAHRLK
GVLRDSIVMLEQLKSSLIMPQKTFDLLNKNKTGMAVES"
BASE COUNT 1226 a 637 c 797 g 1133 t
ORIGIN
1 agcgggcgcg cgctggaggt gggcgcgggg cggtgcggtg cggtgcgcgc ggggcggtgc
61 cgcggcggcg gagggagccg cgatggaggg cgctccgact gtccgtcagg tgatgaatga
121 aggggattca agccttgcca ccgacttaca ggaagatgta gaggaaaatc ctagtccaac
181 tgtggaagag aataatgtgg tagttaaaaa acaggggcca aatttacata attggagtgg
241 tgactggagc ttttggattt caagttccac ctataaagac aggaatgagg aatacagaag
301 acagttcaca catctacctg atacagagag gctgatagca gattatgctt gtgctcttca
361 gagggacatt ttgcttcagg gacgactata cctttcagaa aactggctat gtttctatag
421 caacatcttc agatgggaaa ctacaatttc tattgcttta aagaatataa ccttcatgac
481 caaggaaaaa actgctcgac tcatcccaaa cgctatccag atagttacag aaagtgaaaa
541 gtttttcttc acatcttttg gtgccaggga tagaagttac ctcagtatct ttaggttgtg
601 gcagaatgta ttattagata agagcctgac tagacaggaa ttctggcaac tgctccagca
661 gaactatggc actgagctag gtttaaatgc tgaggagatg gaaaacttgt cactgtcgat
721 tgaggatgtg cagccaagaa gtccaggaag aagcagcttg gatgactctg gggagagaga
781 tgaaaaatta tccaagtcaa tcagttttac cagtgaatca attagtcggg tttcagaaac
841 agagtcattc gatggaaatt catcaaaagg aggattaggc aaagaggagt cccaaaatga
901 gaaacagacc aaaaagagtc tcttaccaac tttggaaaag aagttaacta gagtgccatc
961 aaagtcactg gacttgaata aaaatgaata tctttctctg gacaaaagca gcacttcaga
1021 ttctgttgat gaagaaaatg ttcctgagaa agatcttcat ggaagacttt ttatcaaccg
1081 tatttttcat atcagtgctg acagaatgtt tgaattgctc tttaccagtt cacgctttat
1141 gcagaaattt gccagttcta gaaatataat agatgtagta tctacccctt ggactgcaga
1201 acttggaggt gatcagctga gaacgatgac ctacactata gtccttaata gtccacttac
1261 tggaaaatgc actgctgcca ctgaaaagca gacactgtat aaagaaagtc gggaagcacg
1321 attttatttg gtagattcag aagtactgac acatgatgtc ccctaccatg attacttcta
1381 taccgtgaac agatactgta tcatccgatc ttcaaaacag aaatgcaggc taagagtttc
1441 cacagatttg aaatacagaa aacagccatg gggccttgtc aaatctttaa ttgaaaagaa
1501 ttcctggagt tctttggagg actatttcaa acagcttgaa tcagatttgt taattgaaga
1561 atctgtatta aatcaggcca ttgaagaccc tggaaaactt actggcctac gaaggagaag
1621 gcgaaccttc aaccgaacag cagaaacagt tcctaaactt tcctctcagc attcctctgg
1681 agatgtgggc ttaggtgcca aaggggatat tacaggaaag aaaaaggaaa tggaaaacta
1741 taacgtcact cttattgtgg taatgagtat ttttgtgttg ttattagttt tgttgaatgt
1801 gacactgttt ctgaagctgt caaagataga acatgctgct cagtcctttt accgtctccg
1861 cctccaagaa gagaaatctt taaatttagc ctctgatatg gtgtcaagag cagaaactat
1921 tcagaagaat aaagatcagg cccatcgttt aaagggagtg ctccgagact ccatagtgat
1981 gcttgaacag ctgaagagct cactcattat gcctcagaaa acgtttgatc tactaaataa
2041 gaataagact ggcatggctg ttgaaagcta gtgatctgaa ggactaaaac cgcagagata
2101 cttggaactt aaagaaaata cctggaagaa aaccagacga atgaaggatt ttggcataga
2161 acatttctat gttttttcat tattgagatt tctaatatga acatttcttt cagtaacatt
2221 tatttgataa ttagtttctg ctggccttaa taatccatcc tttcacttct tatagatatt
2281 tttaagctgt gaatttcttc agtgaaccat gaaatatatt atagaactga atttctctga
2341 tacaaaaaga aaatgacaca ccctgaattg agtggtatgg tctcatttct acagtgaagt
2401 ctgatgcttt gttagcacag aatccgtaca tgtccaatag gtcgcttttg taactgagat
2461 aagaccaaga ggataaacag gacaatataa gaagaaacct ctatgtcatt actgatttta
2521 aaggttctgt tttcaggcat ataacatttc caggtttgtg tactgtaaag attataatgt
2581 cttcatttat ttagcatgca aatttaatag tcaaactttt tgaatctgca tgttgatgat
2641 gattatcaga aagggtcttc tgccatgctg tatctttatg aaagaaatag ttgttttttc
2701 ttaaggtaac tatcagaggt gggattatct tgcctcctca cttagaatac caacagtcaa
2761 aaggaagaac catcctctga gttttaaaaa ccagaaggtt atgttaaaat ctgggcattt
2821 agtgacagat caaatgcata cttgaactaa gattggcttc agcttagcag tctttcatgg
2881 tggaagtgac acatctggtt gaaaataatt tgtgtatttt cagtaaccat gtatggcttc
2941 cttctttatg tatgtgtgtg acttgtttta attggtaagt tataagccag acatagattt
3001 tagctcttta ataaaaactt caggggcacg tatgtcccag tacaagtgta ctgactatca
3061 agttttaact cagatgcaag ctttggctct ttcataaaaa gtttttatgc atatgtgtct
3121 ccatacaagt ggctcattaa aataagaact ttgtaaactg acttaaaatc agatattttt
3181 tcaagagtta gggaaagttg aagtgtttta ctgttttgtc tcttgagccc tttctctggg
3241 gaaaaaatac atatccatct atctatctat atataaactg tgtatacatt cttactgttt
3301 gaacaactat tgcctttaat taaatgtttc atttttctcc agagtcccca aagccacatg
3361 gcattattat agtcattttt gagatgcctg tagagaatga aagtattgac tccgttagag
3421 ggaaaatggg tttctctggg tgaattccaa cgaagcatac ctaggggtaa cagtgaacct
3481 acctgggttt gttttgtttt ggtaaggatt tatgtagtgt ctggctgtaa gcaagaatga
3541 gtggattata aacttgaaga tttctctgtt aaagtcacaa aaatgatcga caaacaatat
3601 ttttgtgatg tttatttaaa cgttgtattt tataacatac ttcaaggaag agtatcgaag
3661 taagttgctt tataaattaa gactaaattc gtatggatgc agaattcaat taataaaatt
3721 tgagcctgtt acgtaaattg aatattaata aaattgaaaa tttctgaaaa aaaaaagaaa
3781 aaaaaaaaaa aaa
//