LOCUS BC034999 1896 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens katanin p60 subunit A-like 2, mRNA (cDNA clone
MGC:33211 IMAGE:4829800), complete cds.
ACCESSION BC034999
VERSION BC034999.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1896)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1896)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC034999.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 47 Row: c Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49065663.
FEATURES Location/Qualifiers
source 1..1896
/db_xref="H-InvDB:HIT000051292"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33211 IMAGE:4829800"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1896
/gene="KATNAL2"
/gene_synonym="DKFZP667C165"
/gene_synonym="MGC33211"
/db_xref="GeneID:83473"
/db_xref="HGNC:HGNC:25387"
CDS 195..1595
/gene="KATNAL2"
/gene_synonym="DKFZP667C165"
/gene_synonym="MGC33211"
/codon_start=1
/product="katanin p60 subunit A-like 2"
/protein_id="AAH34999.2"
/db_xref="GeneID:83473"
/db_xref="HGNC:HGNC:25387"
/translation="MEYESYYFVKFQKYPKIVKKSSDTAENNLPQRSRGKTRRMMNDS
CQNLPKINQQRPRSKTTAGKTGDTKSLNKEHPNQEVVDNTRLENANFGLHISRIRKDS
GEENAHPRRGQIIDFQGLLTDAIKGATSELALNTFDHNPDPSERLLKPLSAFIGMNSE
MRELAAVVSRDIYLHNPNIKWNDIIGLDAAKQLVKEAVVYPIRYPQLFTGILSPWKGL
LLYGPPGTGKTLLAKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPS
TIFLDELESVMSQRGTASGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWEL
DCAMLRRLEKRILVDLPSREARQAMIYHWLPPVSKSRALELHTELEYSVLSQETEGYS
GSDIKLVCREAAMRPVRKIFDALENHQSESSDLPRIQLDIVTTADFLDVLTHTKPSAK
NLAQRYSDWQREFESV"
BASE COUNT 580 a 421 c 453 g 442 t
ORIGIN
1 agtaactgac tacttttctc ccttctctag ggtcctagca cagtgtctga tggagctttc
61 ctaccagacc ctgaaattca cgcatcaggc gcgggaagcg gtatatcgat acagcaaatg
121 ctttggagca agaaactaaa ctggggttac gacggtttga agtttgtgac aacattgatc
181 ttgaaactat tttgatggaa tatgagagtt attattttgt aaaatttcag aaatacccca
241 aaattgtcaa aaagtcatca gacacagcag aaaataattt accgcaaaga agtagaggga
301 agaccagaag gatgatgaac gacagttgtc aaaatcttcc caagatcaat cagcagaggc
361 cccggtccaa aaccacagcg gggaagacag gggacaccaa atcgctcaat aaggagcatc
421 ctaatcagga ggtagttgat aacactcgcc tggaaaatgc caacttcggc ctacatatat
481 caagaatccg taaagacagt ggagaggaaa atgcccaccc acgaagaggc caaatcattg
541 acttccaagg gctgctcaca gatgccatca agggagcaac cagtgaactt gccttgaaca
601 ccttcgacca taatccagac ccctcagaac gactgctgaa acctctgagt gcatttattg
661 gcatgaacag tgagatgcga gaattggcag ccgtggtgag ccgggacatt tatctccata
721 atccaaacat aaagtggaat gacattattg gacttgatgc agccaagcag ttagtcaaag
781 aagctgttgt gtatcctata aggtatccac agctatttac aggaattctt tctccctgga
841 aaggactact gctgtacggc cctccaggta caggaaagac tttactggcc aaagctgtgg
901 ccactgaatg taaaacaacc ttctttaaca tttctgcatc caccattgtc agcaaatgga
961 gaggggattc agaaaaactc gttcgggtgt tatttgagct tgcccgctac cacgccccat
1021 ccacgatctt cctggacgag ctggagtcgg tgatgagtca gagaggcaca gcttctgggg
1081 gagaacatga aggaagcctg cggatgaaga cagagttact ggtgcagatg gatgggctgg
1141 cacgctcaga agatctcgta tttgtcttag cagcttctaa cctgccgtgg gagctggact
1201 gtgccatgtt acgccgcctg gagaagagga ttctggtcga tctccccagc cgggaggcca
1261 ggcaggccat gatctaccac tggctgcctc ctgtgagcaa gagcagggcc ttggagctgc
1321 acacagagct ggagtacagt gtgctgagcc aggagactga gggctactca ggctcagata
1381 ttaagctcgt ctgcagggaa gcagccatgc ggcccgtgag gaagatcttt gatgcacttg
1441 aaaatcacca gtcagaaagc agcgacttac ccaggatcca gttggatata gtaaccactg
1501 ccgactttct ggatgtgcta actcacacca agccctccgc aaagaatctg gctcagagat
1561 actcagactg gcaaagagag ttcgagtctg tctgaaacca catttaccct gacctggcca
1621 caaaggcaac cacaaagacc tcctagttta ttaatgtccg tgggagaaca aaatgattgg
1681 aatggaaaag agaaaattat ttttgaagac tggattaact tgagccactg tattgttttg
1741 gatagctgag atatatttat taacttacca ttatcgatgt cagcaaaata ttgagagttt
1801 cagttacata catatatgtg ctattgggtc atacaatgga gatttttctg acaattagac
1861 tccataaaat tttaatgaac aaaaaaaaaa aaaaaa
//