LOCUS BC034925 2409 bp mRNA linear HUM 31-JUL-2002
DEFINITION Homo sapiens, Similar to heterogeneous nuclear ribonucleoprotein U
(scaffold attachment factor A), clone IMAGE:3953856, mRNA, partial
cds.
ACCESSION BC034925
VERSION BC034925.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2409)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (29-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 43 Row: c Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2409
/db_xref="H-InvDB:HIT000093598"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3953856"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
CDS <1..1563
/codon_start=1
/product="Similar to heterogeneous nuclear
ribonucleoprotein U (scaffold attachment factor A)"
/protein_id="AAH34925.1"
/translation="LSASSLTMESFAFLWAGGRASYGVSKGKVCFEMKVTEKIPVRHL
YTKDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGIKTCNCETEDYGEKFDENDVIT
CFANFESDEVELSYAKNGQDLGVAFKISKEVLAGRPLFPHVLCHNCAVEFNFGQKEKP
YFPIPEEYTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLPGAGKTTWVTKHAAENPG
KYNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKFIEIAARKKRNFILDQ
TNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGKDLPEHAVLKMKGN
FTLPEVAECFDEITYVELQKEEAQKLLEQYKEESKKALPPEKKQNTGSKKSNKNKSGK
NQFNRGGGHRGRGGFNMRGGNFRGGAPGNRGGYNRRGNMPQRGGGGGGSGGIGYPYPR
APVFPGRGSYSNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQWQQGQFWGQ
KPWSQHYHQGYY"
BASE COUNT 814 a 393 c 554 g 648 t
ORIGIN
1 ctcagtgctt cttcccttac aatggagagt tttgcttttc tttgggctgg aggaagagca
61 tcctatggtg tgtcaaaagg caaagtgtgt tttgagatga aggttacaga gaagatccca
121 gtaaggcatt tatatacaaa agatattgac atacatgaag ttcgtattgg ctggtcacta
181 actacaagtg gaatgttact tggtgaagaa gaattttctt atgggtattc tctaaaagga
241 ataaaaacat gcaactgtga gactgaagat tatggagaaa agtttgatga aaatgatgtg
301 attacatgtt ttgctaactt tgaaagtgat gaagtagaac tctcgtatgc taagaatgga
361 caagatcttg gcgttgcctt caaaatcagt aaggaagttc ttgctggacg gccactgttc
421 ccgcatgttc tctgccacaa ctgtgcagtt gaatttaatt ttggtcagaa ggaaaagcca
481 tattttccaa tacctgaaga gtatactttc atccagaacg tccccttaga ggatcgagtt
541 agaggaccaa aggggcctga agagaagaaa gattgtgaag ttgtgatgat gattggcttg
601 ccaggagctg gaaaaactac ctgggttact aaacatgcag cagaaaatcc agggaaatat
661 aacattcttg gcacaaatac tattatggat aagatgatgg tggcaggttt taagaagcaa
721 atggcagata ctggaaaact gaacacactg ttgcagagag ccccccagtg tcttgggaaa
781 tttattgaga ttgctgcccg aaagaagcga aattttattc tggatcagac aaatgtgtct
841 gctgctgccc agaggagaaa aatgtgcctg tttgcaggct tccagcgaaa agctgttgta
901 gtttgcccaa aagatgaaga ctataagcaa agaacacaga agaaagcaga agtagagggg
961 aaagacctac cagaacatgc ggtcctcaaa atgaaaggaa actttaccct cccagaggta
1021 gctgagtgct ttgatgaaat aacctatgtt gaacttcaga aggaagaagc ccaaaaactc
1081 ttggagcaat ataaggaaga aagcaaaaag gctcttccac cagaaaagaa acagaacact
1141 ggctcaaaga aaagcaataa aaataagagt ggcaagaacc agtttaacag aggtggtggc
1201 catagaggac gtggaggatt caatatgcgt ggtggaaatt tcagaggagg agcccctggg
1261 aatcgtggcg gatataatag gaggggcaac atgccacaga gaggtggtgg cggtggagga
1321 agtggtggaa tcggctatcc ataccctcgt gcccctgttt ttcctggccg tggtagttac
1381 tcaaacagag ggaactacaa cagaggtgga atgcccaaca gagggaacta caaccagaac
1441 ttcagaggac gaggaaacaa tcgtggctac aaaaatcaat ctcagggcta caaccagtgg
1501 cagcagggtc aattctgggg tcagaagcca tggagtcagc attatcacca aggatattat
1561 tgaataccca aataaaacga actgatacat atttctccaa aaccttcaca agaagtcgac
1621 tgttttcttt agtaggctaa ctttttaaac attccacaag aggaagtgcc tgcgggttcc
1681 ttttttagaa gctttgtggg ttgatttttt ttcttttctt ttttgtacat ttttaattgc
1741 agtttaaaag tgaatcgtaa gagaacctca gcattgtgca cgataagaga atgtgtcagt
1801 atttcagggt tctacatttt atctgtaaaa tgtgactttt tttttttttt atcacaacag
1861 aagtaaaatg ttgctttgta cctggtgtct tttattaaga atttactccc cccatttctc
1921 acagagaata acagtcggga gtcattgtca caatataata gaaatgttag caaccagatt
1981 catgtaagga ctaagtggtc ctcatgaatt gcattaagac tctgtactgc tcatattaca
2041 ctccatcctc tctgtagttt gctgggtagt ggagggggta agctaaatca tagtttctga
2101 caataactgg gaaggttttt tcttaaaata acaatggaat tggtataatt gggattgaaa
2161 actaaaactt ggaactaaga tagagaagat ggagtgtatg tagaagggct gttaaaaatg
2221 taaaacttgg ttgcattatt tgtggaggct caaacttgtg aaggttaata ccataatttt
2281 tccatttgtt ctgcattttg attctgaaaa gaaagctggc tttgcccatt tcttattaaa
2341 aaaacttgtt gtaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2401 aaaaaaaaa
//