LOCUS BC034821 1204 bp mRNA linear HUM 06-OCT-2005
DEFINITION Homo sapiens synaptonemal complex central element protein 1, mRNA
(cDNA clone MGC:35014 IMAGE:5164386), complete cds.
ACCESSION BC034821
VERSION BC034821.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1204)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1204)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: j Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18640753.
FEATURES Location/Qualifiers
source 1..1204
/db_xref="H-InvDB:HIT000051246"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35014 IMAGE:5164386"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1204
/gene="SYCE1"
/gene_synonym="bA108K14.6"
/gene_synonym="RP11-108K14.6"
/db_xref="GeneID:93426"
/db_xref="HGNC:HGNC:28852"
/db_xref="IMGT/GENE-DB:28852"
/db_xref="MIM:28852"
CDS 164..1111
/gene="SYCE1"
/gene_synonym="bA108K14.6"
/gene_synonym="RP11-108K14.6"
/codon_start=1
/product="SYCE1 protein"
/protein_id="AAH34821.1"
/db_xref="GeneID:93426"
/db_xref="HGNC:HGNC:28852"
/db_xref="IMGT/GENE-DB:28852"
/db_xref="MIM:28852"
/translation="MEMVQKLQKVGSLEPRVEVLINRINEVQQAKKKANKDLGEARTI
CEALQKELDSLHGEKVHLKEILSKKQETLRILRLHCQEKESEAHRKHTMLQDCKERIS
ALNLQIEEEKNKQRQLRLAFEEQLEDLMGQHKDLWDFHMPERLAREICALDSSKEQLL
KEEKLVKATLEDVKHQLCSLCGAEGPSTLDEGLFLRSQEAAATVQLFQEEHRKAEELL
AAAAQRHQQLQQKCQQQQQKRQRLKEELEKHGMQVPAQAQSTQEEEAGPGDVASPKPL
KGERPGAARQAGPDVLIGQEDTLHPDLSPRGFQEIKELF"
BASE COUNT 420 a 280 c 346 g 158 t
ORIGIN
1 caatcaccac tggaggctcc ctcccgaggc accctcgctg gcgagctgag aggaaatggc
61 ggggaggtcc ctgacatcga aggccgagcc caccgcagga gccgtggaca gggctgagaa
121 ggccggaggg caggacacgt cctcacagaa aattgaagac ttgatggaaa tggtgcaaaa
181 gctgcagaaa gtgggaagcc tagagccccg agttgaggtc ctgattaacc ggattaatga
241 ggtccagcaa gcaaaaaaga aagccaataa agacctagga gaggcccgga ccatctgtga
301 ggccctgcag aaggaactgg actcgctgca tggagagaaa gtacacctga aggagatctt
361 gagcaaaaaa caagagaccc tgaggatcct ccggctgcat tgccaggaaa aggaaagtga
421 ggcacacagg aagcacacca tgttgcagga ttgcaaagag agaatttctg ccctgaactt
481 gcagattgaa gaagagaaga acaaacagag acagctgagg ttggcattcg aggaacagct
541 ggaagatctg atgggccagc acaaggacct ctgggacttc cacatgccag agcggctggc
601 aagggagatt tgtgccctgg acagcagcaa ggagcagctg ctcaaggaag agaagctggt
661 caaggcgaca ctggaagacg tgaagcatca gctgtgctcc ctgtgtgggg ctgagggccc
721 ctccaccctt gatgagggac tctttctccg cagccaggag gctgcagcca cagtgcagct
781 gtttcaggaa gagcacagga aggctgagga gctcctagca gctgctgccc agcgccacca
841 gcagctgcag cagaagtgcc aacaacagca gcagaagcgg cagaggctga aggaagagct
901 ggaaaagcat ggaatgcaag tccctgccca agcccagagc acacaagagg aagaggctgg
961 cccaggagat gtggccagtc ccaagcccct aaaaggagaa agacctggag ctgcacgcca
1021 agcagggcct gatgtcctca taggccagga ggacacactc caccccgacc ttagcccaag
1081 gggctttcag gaaataaagg agctattttg ataaaaaaaa aaaaaaaaaa aaaaaaaaaa
1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1201 aaaa
//