LOCUS BC034813 3608 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens ankyrin repeat domain 10, mRNA (cDNA clone
IMAGE:4822875), with apparent retained intron.
ACCESSION BC034813
VERSION BC034813.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3608)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3608)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 71 Row: g Column: 14
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3608
/db_xref="H-InvDB:HIT000093578"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4822875"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 1056 a 631 c 693 g 1228 t
ORIGIN
1 tttaccatag agccctgtct agaaaccaga ttttcattag gtcaaataca ggtgatgagc
61 atatttaata ttagtgttaa attcatttgt gacttttgcc cttagcaaaa tgtaacctag
121 atttactttt agctattcat tttgaaattc gtggtttctt tatatttgtt catttttttg
181 cccatcagaa taatatttca gttacaaaat ctaccagaat tatgactctg aattcatatt
241 ttctgatttt aggtcctctg aattctagtc atcctcacat cctacttttg cctcctcttt
301 tttttttttt ttttttctaa aaagagacag agtctccctt tgtcgtccag gctaaagtac
361 agtggcatga ttatagttca ctgcaacttc aaactcctgg gctccagtga tcctcctgcc
421 tcagattctt gagtagccag gactataggc acataccacc atgcccaact aatttttaaa
481 aatgttttgt agagatgggg tcttgctgtg ttacccaggc tggtctcaaa ctcctgggct
541 caagcagtcc ttccaccttg gcctcccaga gcactgggtt tacaggtgtg agccactgtg
601 cagcctcctt ttatctaatt gtccccacag cagacttgtc tggtcttggc tattttccgg
661 ttgttaaggt gtttcaggat ggaggaatca gttcctgaga tagttattaa gttctgcctg
721 ctagaaaggg acagtaagtg ggttgatatc attctagact tgttaagaaa ttgttcagaa
781 ttttgattgt ttttcatagc agcttgatta aaatacagat tttaataatt tccttactac
841 ttttataggt agtgctttca aataaaacca gtgtttgcta aatccaaatg tctttctccc
901 ttgctaaatc atagcaggag catgctaaat atttcatcag actactggaa tgatggtttt
961 acattttaat gtttgaaaac ataattttgg ttcaattgca gtgtaaaact attctcagta
1021 actttaaact tgaaaacttg gcaccaaatt tatttaggta gaaactcttt aaaaatagtt
1081 tcttcctatt attaactgaa gaatatattt aagaaagtct tcataattaa ataagagttt
1141 ggataccaaa gggttaaaaa tacacatgta tttcttttgc tgaagatatc ttagatgttt
1201 gctaatgttt tatctttaca aatggacaat ttagtaatgt tttttatctt tttttaatga
1261 ttccatgtat ttgcttattt ccatctagga atagttacta atgtatttga gatacagcat
1321 accaaatttt aaagtaacca gaatcgtgag ttgatggttt ttagtccata ctgttaaact
1381 tatgttgaaa tattgacata tttaaattgg cttcatgcta aaaaattacc aaaggtaatt
1441 taaaaggcag tgttttagag cagtagctca tggtcaaggt ggtcacatga caatggctta
1501 agctcagtgt gcttctgcac cttatgttgt ctatgtattt ttaatccaaa tgttgcctgc
1561 aaatatgtga tcccttatta tttaagtttc ctgtattatg aaccattgcc cgttttaaat
1621 cacacagaag attctgaatc tgtaaaaact acacatgtca atgttttaca gctacgtaat
1681 tcgaattgac ttgatttttt caagtaatcc tagaaagggg gagcattcca tatagaaact
1741 gctgaaactg ccacaggtgc ttctccgaaa accttacagt tgtggcattg aatgttcagt
1801 atcgcttcct ttctgcacac gaggcatact gttgaggtat ttgttgcggt gattggtttt
1861 aacgctaatc taggaattca gatagagatg ctttagattt gcatgctttg cttacctaat
1921 ttatgatatc tacctttcta tttgtaaact aacaatagct aagttgagat cagaatttta
1981 acagaaatat tatttatata aaaattgtta tcttttattg tcacatggca ttaacaataa
2041 gaaaacatcc tgaaggtgat gtgacaactc ggattctaaa aattatactt caggtatttc
2101 ctgatccgtg gtttttcaaa attgaaacaa agtcgttctc atcagaatgg cttctccttt
2161 gttctggaat tgtggcacta taagtggaaa ctggtgggac cctggctggc ttcagagtgg
2221 agcctaattt ttaaagttct ttaggggaga attcttagat ataaatttta gtgaaagttc
2281 tttgggggag aattcttaga tataaatttg agtgtttgaa gagacagggt cttcctgtgt
2341 tgcctaggct ggtctcaaac ttctggcctc aagtgatcct cctgcttctg cctcccaaag
2401 cgccaggatt atagggttga gccactgtgc ttggcttaga ggtaataaat tttaatattc
2461 tattcagaat aagaaaatat agcatataag catttgtatc tttagtaaag ttactgccag
2521 tttgattttt ttttttgcaa gttacttagc agaacatgta attcacagta aagatgattc
2581 tgtgttgtac catattttaa tattcctgtt ttgaaagaat agtagagaga aaatgggtgg
2641 cctgctcagt gattgctttt cgtagtcttg gtgaatgtta caggagattg aatttataga
2701 taaaagcaca gtcatcatag tttccacagt acattgcagc acatttagct tgctagccta
2761 aaaatctgat catgctgagt ttcttttaaa gaaagttaat tttagaactt caaactagaa
2821 ccagtttgaa cctcaagttg accgttgtct gagttttaaa aatctcttcc cattttcaaa
2881 gatttttcaa atggatgtag gagaggacca aggaggtagg ctatagctgt agaacaacac
2941 agtcctattt tcagaaacga acagacacac gttttaggtc aggcacagcc catgtatcca
3001 ggtgcatcaa actggggatg ctaagttcaa aagtgcgtct gttttgaaga tttcatctga
3061 aaataatgtg tacactttca ttactaccag tttgcattca aaatagtttt tgagactctt
3121 taaactcttc tggatacttt aattttccct ttggaatagt gtgtaaacac agtccggatg
3181 aactttacta ctgatacctc acttgaggtt gacaggagtg gccagcagtt agtgcctatg
3241 gtcatgtaat acactaagtc aatacctgtg gagtgaaatc cggtctctat aaaaaataca
3301 aaaaaaatgg ctggacgcag tggctctcgc ctgtaatccc agcactttgg gaggctgagg
3361 tgggtgggtc atctgaggtc aggagttcaa gaccagcctg gccaacatgg tgaaaccccg
3421 tctctactaa aaatacaaaa aattagctgg gtgtggtggt gggcgcttgt aataccagct
3481 actcgggagg ctgaagcagg agaatctctt gaacctggga ggcagaggtt gcggtgagcc
3541 aagatcacgc cattgcactc cagcctaggc aacaagagtg aaactccgtc tcaaaaaaaa
3601 aaaaaaaa
//