LOCUS BC034629 1067 bp mRNA linear HUM 16-SEP-2005
DEFINITION Homo sapiens LY6/PLAUR domain containing 4, mRNA (cDNA clone
MGC:42718 IMAGE:4827584), complete cds.
ACCESSION BC034629
VERSION BC034629.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1067)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1067)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC034629.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 72 Row: b Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255169.
FEATURES Location/Qualifiers
source 1..1067
/db_xref="H-InvDB:HIT000051193"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:42718 IMAGE:4827584"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1067
/gene="LYPD4"
/gene_synonym="MGC42718"
/db_xref="GeneID:147719"
CDS 347..982
/gene="LYPD4"
/gene_synonym="MGC42718"
/codon_start=1
/product="LYPD4 protein"
/protein_id="AAH34629.1"
/db_xref="GeneID:147719"
/translation="MGPQHLRLVQLFCLLGAISTLPRMSCGAGCYKTQKGTARGVVGF
KGCSSSSSYPAQISYLVSPPGVSIASYSRVCRSYLCNNLTNLEPFVKLKASTPKSITS
ASCSCPTCVGEHMKDCLPNFVTTNSCPLAASTCYSSTLKFQAGFLNTTFLLMGCAREH
NQLLADFHHIGSIKVTEVLNILEKSQIVGAASSRQDPAWGVVLGLLFAFRD"
BASE COUNT 254 a 277 c 267 g 269 t
ORIGIN
1 cttttctgcg ggtcttggca cctttcttgg ccacagattt ctgggttaca gagcatgtgt
61 gtctgaggca ttgcaggcag aaaagggtgg ccgacgtgac ctctagctgg actgctgggc
121 aggggagctg tcctagataa aattggaaag caccttgtcc aatgggagga cctaagtggg
181 agagtgagag tcctgctttg agaagctaag atggtggatg gtgcagaaac agtgacccag
241 agacaggtgg acaaagaatt cggggactga tgggaactga gcttgggatc cagactgaaa
301 ctgattccag actgacctct agcacccagg acccagacac agggccatgg gaccccagca
361 tttgagactt gtgcagctgt tctgccttct aggggccatc tccactctgc ctcgtatgtc
421 ctgtggggct ggatgctata agacccagaa agggactgca aggggagtcg tgggctttaa
481 aggctgcagc tcgtcttcgt cttaccctgc gcaaatctcc taccttgttt ccccacccgg
541 agtgtccatt gcctcctaca gtcgcgtctg ccggtcttat ctctgcaaca acctcaccaa
601 tttggagcct tttgtgaaac tcaaggccag cactcctaag tctatcacat ctgcgtcctg
661 tagctgcccg acctgtgtgg gcgagcacat gaaggattgc ctcccaaatt ttgtcaccac
721 taattcttgc cccttggctg cttctacgtg ttacagttcc accttaaaat ttcaggcagg
781 gtttctcaat accaccttcc tcctcatggg gtgtgctcgt gaacataacc agcttttagc
841 agattttcat catattggga gcatcaaagt gactgaggtc ctcaacatct tagagaagtc
901 tcagattgtt ggtgcagcat cctccaggca agatcctgct tggggtgtcg tcttaggcct
961 cctgtttgcc ttcagggact gaccatctag ctgcacccga caagcaccca gactctttca
1021 cataacaaat aaaatagcag agttcccttt caaaaaaaaa aaaaaaa
//