LOCUS BC034604 3179 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens striatin, calmodulin binding protein 4, mRNA (cDNA
clone MGC:41839 IMAGE:4829172), complete cds.
ACCESSION BC034604
VERSION BC034604.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3179)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3179)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 72 Row: e Column: 20.
FEATURES Location/Qualifiers
source 1..3179
/db_xref="H-InvDB:HIT000051190"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:41839 IMAGE:4829172"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3179
/gene="STRN4"
/gene_synonym="ZIN"
/gene_synonym="zinedin"
/db_xref="GeneID:29888"
/db_xref="HGNC:HGNC:15721"
CDS 11..2272
/gene="STRN4"
/gene_synonym="ZIN"
/gene_synonym="zinedin"
/codon_start=1
/product="striatin, calmodulin binding protein 4"
/protein_id="AAH34604.1"
/db_xref="GeneID:29888"
/db_xref="HGNC:HGNC:15721"
/translation="MMEERAAAAVAAAASSCRPLGSGAGPGPTGAAPVSAPAPGPGPA
GKGGGGGGSPGPTAGPEPLSLPGILHFIQHEWARFEAEKARWEAERAELQAQVAFLQG
ERKGQENLKTDLVRRIKMLEYALKQERAKYHKLKFGTDLNQGEKKADVSEQVSNGPVE
SVTLENSPLVWKEGRQLLRQYLEEVGYTDTILDMRSKRVRSLLGRSLELNGAVEPSEG
APRAPPGPAGLSGGESLLVKQIEEQIKRNAAGKDGKERLGGSVLGQIPFLQNCEDEDS
DEDDELDSVQHKKQRVKLPSKALVPEMEDEDEEDDSEDAINEFDFLGSGEDGEGAPDP
RRCTVDGSPHELESRRVKLQGILADLRDVDGLPPKVTGPPPGTPQPRPHEDVFIMDTI
GGGEVSLGDLADLTVTNDNDLSCDLSDSKDAFKKTWNPKFTLRSHYDGIRSLAFHHSQ
SALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGPVLAVAMGSNSEYCYS
GGADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAFSPTSQRLASCSADG
TVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIVASFRSGDTVLYDMEVGS
ALLTLESRGSSGPTQINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVAHLDAV
TCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEITAHRKKHEEAIHAVACHPSKALI
ASAGADALAKVFV"
BASE COUNT 621 a 1023 c 968 g 567 t
ORIGIN
1 gggggcctcc atgatggagg agcgagcggc cgccgcggtc gccgccgccg cctcctcctg
61 ccgtccgctc ggctcaggcg cgggccctgg ccccactggg gcggccccgg tctccgcccc
121 tgcccccggg ccgggcccgg caggtaaggg aggcggcggc ggaggcagcc ccgggcccac
181 ggcgggcccg gagcccctga gcctgccggg gatcctgcac tttatccagc acgagtgggc
241 gcgcttcgaa gccgagaaag cccgctggga ggccgagcgc gccgagttac aggctcaggt
301 ggccttcctt cagggagaga ggaaagggca ggagaatcta aagacggacc tggtgcggcg
361 gatcaagatg ctagagtatg cgctgaagca ggaaagggcc aaatatcata aactgaagtt
421 tgggacagac ctgaaccagg gggagaagaa agcagatgtg tcagaacaag tctccaatgg
481 ccccgtggaa tcggtcaccc tggagaacag cccgttggtg tggaaggagg ggcggcagct
541 tctccgacag tacctggaag aggtgggcta cacagacacc atcctcgaca tgcggtccaa
601 gcgcgtccgt tccctgctgg gccgctcgct ggagctcaac ggggcagtgg agccgagtga
661 aggggccccc agggctccac caggccctgc agggctcagt ggtggggagt cgctgctggt
721 gaaacagatc gaggagcaga taaagaggaa cgcggcaggc aaagatggca aagagcgctt
781 gggcggctca gtgctggggc agatcccctt cctgcagaac tgcgaggacg aagacagcga
841 cgaggacgat gagctggaca gcgtgcagca caagaagcag cgtgtgaagc tcccatccaa
901 ggctctggtg cccgaaatgg aagacgagga tgaggaagac gactctgagg atgctatcaa
961 tgagtttgat ttcctgggct caggagagga tggggaaggg gctccagacc ctcggcggtg
1021 cactgtggat gggagccccc atgagctgga aagccgtcgg gtcaaactcc aaggcattct
1081 ggctgacctg cgggatgtgg atgggctgcc cccaaaagtg actggcccgc ctcctggcac
1141 accccagccc cggccacatg aagacgtctt catcatggac actatcgggg gcggggaggt
1201 gagcctgggg gacttggcag atctcaccgt caccaacgac aacgacctca gctgcgatct
1261 gtctgacagc aaagatgctt ttaagaagac gtggaacccc aagttcaccc tgcgctcgca
1321 ctacgacggc attcgttccc tggccttcca ccacagccag tcggctctgc tcaccgcctc
1381 cgaggacggc acgctcaagc tctggaacct gcagaaggcg gtcacggcca agaagaatgc
1441 ggcgctagat gtggaaccta tacatgcttt ccgggctcac aggggcccag tgttggctgt
1501 ggctatgggc agcaacagtg aatactgcta cagtggcggg gcagatgcct gcatccatag
1561 ttggaagatt ccagacctca gcatggatcc ctatgatggc tacgacccaa gcgtgctgag
1621 ccacgtcctg gagggccacg gggacgccgt gtggggcctg gccttcagtc ccacctccca
1681 gcgcctggcc tcctgttctg ctgatggcac cgtccgcatc tgggacccca gcagcagcag
1741 cccggcctgc ctctgcacct tccccacagc cagcgagcac ggggtcccca cctcagtggc
1801 cttcaccagc accgagcctg cccacatcgt ggcctccttc cgctctggcg acaccgtctt
1861 gtatgacatg gaggttggca gtgccctcct cacgctggag tcccggggca gcagcggtcc
1921 aacccagatc aaccaagtgg tgagtcatcc aaaccagcct ctcaccatca ccgcccacga
1981 cgacaggggc atccgcttcc tggacaatcg gacaggtaag ccggtgcact ccatggttgc
2041 acacctggac gcagtcacct gcctagccgt ggaccccaac ggcgcattcc tgatgtcagg
2101 aagccatgac tgctccctgc gtctctggag cctggacaac aaaacgtgcg tgcaggagat
2161 cacggcccac cgcaagaagc acgaggaggc catccacgct gttgcctgcc accccagcaa
2221 ggccctcatt gccagtgctg gcgctgatgc cctggccaag gtcttcgtat gatgcccacc
2281 tggccatgcc ctggccgcca cgctggctgg ggtgtagggc cgggcaggtg gggctgaggg
2341 gactcccagc ctcgctggag gtgcagaggc ctggcctctg tctgtttgcc gtggagcctg
2401 gtggtgctaa cggccctttc cccaggaatc cctccccaac ggctgccttc cccaagcatc
2461 cagcctgggg atgggcccct ttcaggaatc acccccgagg atggcctcgg ggtttccccc
2521 tgtgccctga cagccgctcc tggtatcaga gctgctttcc agagggcagc acagccaggg
2581 ccgggtgtct ttagggatca gtttttccaa gactccagaa ggtgccaggt tctccccttg
2641 agctcctgct cccccatccc ccatcctccc agacctgggc aggagctgtg ctgggagaaa
2701 gggtggcagc cgggagcctc agagctgagc cccggcctgg ctgcccctcc cctccggccc
2761 tctccactgc tttccagaca ctaaccaagg cttccaggcc agggattgcc caacactcct
2821 agggcagccc tcccagcgcc ccatggggtc gcccatgggt agagacggct ttcttgtgcc
2881 cctccctggg gcatggaggg tggagtgggc ctcgggtccc cctgaactcc ctgtatatct
2941 gtataaataa cgggattttc atggcgccgc cccacccgca ttatcactgt gtgatggtct
3001 cagtcagtct cctccctgtc tccactcttt ccctctattt atttcactct cttgtttggt
3061 tctaccctgc accctcggtc cccttccagg ttcctgttta taagccccaa cccctctgtc
3121 cccatcttgt atgtgaaaac ttgtctcaat aaaccctttg gagaaaaaaa aaaaaaaaa
//