LOCUS BC034575 3587 bp mRNA linear HUM 18-JAN-2005
DEFINITION Homo sapiens ATPase type 13A2, mRNA (cDNA clone IMAGE:5139467),
partial cds.
ACCESSION BC034575
VERSION BC034575.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3587)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3587)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 52 Row: h Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..3587
/db_xref="H-InvDB:HIT000093478"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5139467"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3587
/gene="ATP13A2"
/gene_synonym="HSA9947"
/db_xref="GeneID:23400"
CDS <1..3268
/gene="ATP13A2"
/gene_synonym="HSA9947"
/codon_start=2
/product="ATP13A2 protein"
/protein_id="AAH34575.1"
/db_xref="GeneID:23400"
/translation="RDKEDSSWQLFTVQVQTEAIGEGSLEPSPQSQAEDGRSQAAVGA
VPEGAWKDTAQLHKSEEAVSVGQKRVLRYYLFQGQRYIWIETQQAFYQVSLLDHGRSC
DDVHRSRHGLSLQDQMVRKAIYGPNVISIPVKSYPQLLVDEALNPYYGFQAFSIALWL
ADHYYWYALCIFLISSISICLSLYKTRKQSQTLRDMVKLSMRVCVCRPGGEEEWVDSS
ELVPGDCLVLPQEGGLMPCDAALVAGECMVNESSLTGESIPVLKTALPEGLGPYCAET
HRRHTLFCGTLILQARAYVGPHVLAVVTRTGFCTAKGGLVSSILHPRPINFKFYKHSM
KFVAALSVLALLGTIYSIFILYRNRVPLNEIVIRALDLVTVVVPPALPAAMTVCTLYA
QSRLRRQGIFCIHPLRINLGGKLQLVCFDKTGTLTEDGLDVMGVVPLKGQAFLPLVPE
PRRLPVGPLLRALATCHALSRLQDTPVGDPMDLKMVESTGWVLEEEPAADSAFGTQVL
AVMRPPLWEPQLQAMEEPPVPVSVLHRFPFSSALQRMSVVVAWPGATQPEAYVKGSPE
LVAGLCNPETVPTDFAQMLQSYTAAGYRVVALASKPLPTVPSLEAAQQLTRDTVEGDL
SLLGLLVMRNLLKPQTTPVIQALRRTRIRAVMVTGDNLQTAVTVARGCGMVAPQEHLI
IVHATHPERGQPASLEFLPMESPTAVNGVKDPDQAASYTVEPDPRSRHLALSGPTFGI
IVKHFPKLLPKVLVQGTVFARMAPEQKTELVCELQKLQYCVGMCGDGANDCGALKAAD
VGISLSQAEASVVSPFTSSMASIECVPMVIREGRCSLDTSFSVFKYMALYSLTQFISV
LILYTINTNLGDLQFLAIDLVITTTVAVLMSRTGPALVLGRVRPPGALLSVPVLSSLL
LQMVLVTGVQLGGYFLTLAQPWFVPLNRTVAAPDNLPNYENTVVFSLSSFQYLILAAA
VSKGAPFRRPLYTNVPFLVALALLSSVLVGLVLVPGLLQGPLALRNITDTGFKLLLLG
LVTLNFVGAFMLESVLDQCLPACLRRLRPKRASKKRFKQLERELAEQPWPPLPAGPLR
"
BASE COUNT 686 a 1182 c 1060 g 659 t
ORIGIN
1 aagagacaaa gaggatagtt cctggcagct cttcactgtc caggtgcaga ctgaggccat
61 cggcgagggc agcctggagc cgtccccaca gtcccaggca gaggatggcc ggagccaggc
121 ggcagttggg gcggtaccag agggtgcctg gaaggatacg gcccagctcc acaagagcga
181 ggaggcggtg agtgtcggac agaagcgggt gctgcggtat tacctcttcc agggccagcg
241 ctatatctgg atcgagaccc agcaagcctt ctaccaggtc agcctcctgg accatggccg
301 ctcttgtgac gacgtccacc gctcccgcca tggcctcagc ctccaggacc aaatggtgag
361 gaaggccatt tacggcccca acgtgatcag cataccggtc aagtcctacc cccagctgct
421 ggtggacgag gcactgaacc cctactatgg gttccaggcc ttcagcatcg cgctgtggct
481 ggctgaccac tactactggt acgccctgtg catcttcctc atttcctcca tctccatctg
541 cctgtcgctg tacaagacca gaaagcaaag ccagactcta agggacatgg tcaagttgtc
601 catgcgggtg tgcgtgtgcc ggccaggggg agaggaagag tgggtggact ccagtgagct
661 agtgcccgga gactgcctgg tgctgcccca ggagggtggg ctgatgccct gtgatgccgc
721 cctggtggcc ggcgagtgca tggtgaatga gagctctctg acaggagaga gcattccagt
781 gctgaagacg gcactgccgg aggggctggg gccctactgt gcagagacac accggcggca
841 cacactcttc tgcgggaccc tcatcttgca ggcccgggcc tatgtgggac cgcacgtcct
901 ggcagtggtg acccgcacag ggttctgcac ggcaaaaggg ggcctggtga gctccatctt
961 gcacccccgg cccatcaact tcaagttcta taaacacagc atgaagtttg tggctgccct
1021 ctctgtcctg gctctcctcg gcaccatcta cagcatcttc atcctctacc gaaaccgggt
1081 gcctctgaat gagattgtaa tccgggctct cgacctggtg accgtggtgg tgccacctgc
1141 cctgcctgct gccatgactg tgtgcacgct ctacgcccag agccgactgc ggagacaggg
1201 cattttctgc atccacccac tgcgcatcaa cctggggggc aagctgcagc tggtgtgttt
1261 cgacaagacg ggcaccctca ctgaggacgg cttagacgtg atgggggtgg tgcccctgaa
1321 ggggcaggca ttcctgcccc tggtcccaga gcctcgccgc ctgcctgtgg ggcccctgct
1381 ccgagcactg gccacctgcc atgccctcag ccggctccag gacacccccg tgggcgaccc
1441 catggacttg aagatggtgg agtctactgg ctgggtcctg gaggaagagc cggctgcaga
1501 ctcagcattt gggacccagg tcttggcagt gatgagaccc ccactttggg agccccagct
1561 gcaggcaatg gaggagcccc cggtgccagt cagcgtcctc caccgcttcc ccttctcttc
1621 ggctctgcag cgcatgagtg tggtggtggc gtggccaggg gccactcagc ccgaggccta
1681 cgtcaaaggc tccccggagc tggtggcagg gctctgcaac cccgagacag tgcccaccga
1741 cttcgcccag atgctgcaga gctatacagc tgctggctac cgtgtcgtgg ccctggccag
1801 caagccactg cccactgtgc ccagcctgga ggcagcccag caactgacga gggacactgt
1861 ggaaggagac ctgagcctcc tggggctgct ggtcatgagg aacctactga agccgcagac
1921 aacgccagtt atccaggctc tgcgaaggac ccgcatccgc gccgtcatgg tgacagggga
1981 caacctgcag acagcggtga ctgtggcccg gggctgtggc atggtggccc cccaggagca
2041 tctgatcatc gtccacgcca cccaccctga gcggggtcag cctgcctctc tcgagttcct
2101 gccgatggag tcccccacag ccgtgaatgg cgttaaggat cctgaccagg ctgcaagcta
2161 caccgtggag ccagaccccc gatccaggca cctggccctc agcgggccca cctttggtat
2221 cattgtgaag cacttcccca agctgctgcc caaggtcctg gtccagggca ctgtctttgc
2281 ccgcatggcc cctgagcaga agacagagct ggtgtgcgag ctacagaagc ttcagtactg
2341 cgtgggcatg tgcggagacg gcgccaatga ctgtggggcc ctgaaggcgg ctgatgtcgg
2401 catctcgctg tcccaggcag aagcctcagt ggtctcaccc ttcacctcga gcatggccag
2461 tattgagtgc gtgcccatgg tcatcaggga ggggcgctgt tcccttgaca cttcattcag
2521 cgtcttcaag tacatggctc tgtacagcct gacccagttc atctccgtcc tgatcctcta
2581 cacgatcaac accaacctgg gtgacctgca gttcctggcc atcgacctgg tcatcaccac
2641 cacagtggca gtgctcatga gccgcacggg gccagcgctg gtcctgggac gggtgcggcc
2701 accgggggcg ctgctcagcg tgcccgtgct cagcagcctg ctgctgcaga tggtcctggt
2761 gaccggcgtg cagctagggg gctacttcct gaccctggcc cagccatggt tcgtgcctct
2821 gaacaggaca gtggccgcac cagacaacct gcccaactac gagaacaccg tggtcttctc
2881 tctgtccagc ttccagtacc tcatcctggc tgcagccgtg tccaaggggg cgcccttccg
2941 ccggccgctc tacaccaatg tgcccttcct ggtggccctg gcgctcctga gctccgtcct
3001 ggtgggcctt gtcctggtcc ccggcctcct gcaggggccg ctggcgctga ggaacatcac
3061 tgacaccggc ttcaagctgc tgctgctggg tctggtcacc ctcaacttcg tgggggcctt
3121 catgctggag agcgtgctag accagtgcct ccccgcctgc ctgcgccgcc tccggcccaa
3181 gcgggcctcc aagaagcgct tcaagcagct ggaacgagag ctggccgagc agccctggcc
3241 gccgctgccc gccggccccc tgaggtagtg caggcccacg ggcaccccag acactggaac
3301 tccctgcctc tgagccacca actggacccc tctccagcaa caccaccgcc accacctccc
3361 acatccctga ggttggcgac tgtctacact cctcccccga gaccaccccc accctgggga
3421 agcgttgact actgtcccct accttggacc atcccgcgta ggggtggcag cccccagctc
3481 ccctcagtgc tgctgtcagt gtagcaaata aagtcatgat attttcctgg ccaaaaaaaa
3541 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//