LOCUS BC034562 569 bp mRNA linear HUM 22-DEC-2006
DEFINITION Homo sapiens SIVA1, apoptosis-inducing factor, mRNA (cDNA clone
MGC:17039 IMAGE:3860364), complete cds.
ACCESSION BC034562
VERSION BC034562.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 569)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 569)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-JUL-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: e Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11277467.
FEATURES Location/Qualifiers
source 1..569
/db_xref="H-InvDB:HIT000051185"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:17039 IMAGE:3860364"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_66"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..569
/gene="SIVA1"
/gene_synonym="CD27BP"
/gene_synonym="SIVA"
/gene_synonym="Siva-1"
/gene_synonym="Siva-2"
/db_xref="GeneID:10572"
/db_xref="HGNC:HGNC:17712"
/db_xref="MIM:605567"
CDS 44..376
/gene="SIVA1"
/gene_synonym="CD27BP"
/gene_synonym="SIVA"
/gene_synonym="Siva-1"
/gene_synonym="Siva-2"
/codon_start=1
/product="SIVA1, apoptosis-inducing factor"
/protein_id="AAH34562.1"
/db_xref="GeneID:10572"
/db_xref="HGNC:HGNC:17712"
/db_xref="MIM:605567"
/translation="MPKRSCPFADVAPLQLKVRVSQRELSRGVCAERYSQEVFDPSGV
ASIACSSCVRAVDGKAVCGQCERALCGQCVRTCWGCGSVACTLCGLVDCSDMYEKVLC
TSCAMFET"
BASE COUNT 105 a 159 c 189 g 116 t
ORIGIN
1 gggctggcgg ccggggagct gcgtagctcc cggccccgcg gccatgccca agcggagctg
61 ccccttcgcg gacgtggccc cgctacagct caaggtccgc gtgagccaga gggagttgag
121 ccgcggcgtg tgcgccgagc gctactcgca ggaggtcttc gacccatctg gggtagcgtc
181 cattgcctgt tcctcatgcg tgcgagccgt ggatgggaag gcggtctgcg gtcagtgtga
241 gcgagccctg tgcgggcagt gtgtgcgcac ctgctggggc tgcggctccg tggcctgtac
301 cctgtgtggc ctcgtggact gcagtgacat gtacgagaaa gtgctgtgca ccagctgtgc
361 catgttcgag acctgaggct ggctcaagcc ggctgccttc accgggagcc acgccgtgca
421 tggcagcctt ccctggacga gcgctcggtg ttcacactga actgtggggt cgacgggagg
481 ggtgcctttt acatgttcta ttttgtatcc taatgacaga atgaataaac ctctttatat
541 ttgcacaaga aaaaaaaaaa aaaaaaaaa
//